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Recent Publications
2016
"Ab initio quantum-chemical computations of the electronic states in HgBr
2
and IBr: Molecules of interest on the Earth’s atmosphere"
Sebastian Sitkiewicz, Juan Z. Dávalos, Rafael Notario, Josep Oliva, Alfonso Saiz-Lopez, Diego Ricardo Alcoba, Ofelia B. Oña, and Daniel Roca-Sanjuán
The Journal of Chemical Physics
, submited (2016)
"
Mechanism of the Excited State Deactivation of Indan-1-ylidine and Fluoren-9-yilidine Malononitriles"
Leandro A. Estrada, Antonio Francés-Monerris, Igor Schapiro, Massimo Olivucci and Daniel Roca-Sanjuán
Physical Chemistry Chemical Physics (2016)
"Thermochromic Fluorescence from B
18
H
20
(NC
5
H
5
)
2
– An inorganic-organic composite luminiscent compound with an unusual molecular geometry"
Michael Londesborough, Jirí Dolanský, Luís Cerdán, Kamil Lang, Tomás Jelínek, Josep Oliva, Brahomir Hnyk, Daniel Roca-Sanjuán, Antonio Francés-Monerris, Jirí Martincik, Martin Nikl, John Kennedy
Advanced Optical Materials, Submitted
(2016)
"A Combined Experimental and Theoretical Approach to the Photogeneration of 5,6-Dihydropyrimidin-5-yl Radicals in Non-Aqueous Media"
Isabel Aparici-Espert, Antonio Francés-Monerris, Gemma M. Rodríguez-Muñiz, Daniel Roca-Sanjuán, Virginie Lhiaubet-Vallet, and Miguel A. Miranda
The Journal of Organic Chemistry
, accepted (2016)
"Spectroscopic fingerprints of DNA/RNA pyrimidine nucleobases in third-order nonlinear electronic spectra"
Angelo Giussani, Javier Segarra-Martí, Artur Nenov, Ivan Rivalta, Alessandra Tolomelli, Shaul Mukamel, Marco Garavelli
Theoretical Chemistry Accounts
, 135, 121 (2016)
"Multiple decay mechanisms and 2D-UV spectroscopic fingerprints of singlet excited solvated adenine-uracil monophosphate"
Quansong Li, Angelo Giussani, Javier Segarra-Martí, Artur Nenov, Ivan Rivalta, Alexander A. Voityuk, Shaul Mukamel, Daniel Roca-Sanjuán, Marco Garavelli and Lluís Blancafort
Chemistry - A European Journal
, accepted (2016)
"Hydrogen abstraction by photoexcited benzophenone: Consequences for DNA photosensitization"
Marco Marazzi, Meilani Wibowo, Hugo Gattuso, Elise Dumont, Daniel Roca-Sanjuán and Antonio Monari
Physical Chemistry Chemical Physics
, 18, 7829 (2016)
"Benzophenone Ultrafast Triplet Population: Revisiting the Kinetic Model by Surface-Hopping Dynamics"
Marco Marazzi, Sebastian Mai, Daniel Roca-Sanjuán, Mickaël G. Delcey, Roland Lindh, Leticia González, and Antonio Monari
The Journal of Physical Chemistry Letters
, 7, 622-626 (2016)
2015
"Theoretical study on the excited-state π-stacking versus intermolecular hydrogen‑transfer processes in the guanine–cytosine/cytosine trimer"
Antonio Francés-Monerris, Javier Segarra-Martí, Manuela Merchán, and Daniel Roca-Sanjuán
Theoretical Chemistry Acta
, 135, 31 (2015)
"Complete-active-space second-order perturbation theory (CASPT2//CASSCF) study of the dissociative electron attachment in canonical DNA nucleobases caused by low-energy electrons (0-3 eV)"
Antonio Francés-Monerris, Javier Segarra-Martí, Manuela Merchán, and Daniel Roca-Sanjuán
The Journal of Chemical Physics
, 143, 215101 (2015)
"Investigations on the synthesis and chemiluminescence of novel 2-coumaranones - II"
Stefan Schramm, Luiz Francisco Monteiro Leite Ciscato, Pascal Oesau, Reimar Krieg, Jan Frank Richter, Isabelle Navizet, Daniel Roca-Sanjuán, Dieter Weiss, Rainer Beckert
ARKIVOC
, Issue 5, 44-59 (2015)
"Theoretical Study of the Dark Photochemistry of 1,3-Butadiene and the Chemiluminescence of Dewar Dioxetane"
Pooria Farahani, Marcus Lundberg, Roland Lindh, and Daniel Roca-Sanjuán
Physical Chemistry Chemical Physics
, 17, 18653-18664 (2015)
"Quantum chemistry of Excited States in Polyhedral Boranes".
Josep Marias Oliva, Antonio Francés-Monerris and Daniel Roca-Sanjuán
In:
"Boron: The Fifth Element"
, submitted
Eds. M. L. McKee and D. Hnyk, Springer, London (2015)
"Resolving the Benzophenone DNA-Photosensitization Mechanism at QM/MM Level"
Elise Dumont, Meilani Wibowo, Daniel Roca-Sanjuán, Marco Garavelli, Xavier Assfeld, and Antonio Monari
Journal of Physical Chemistry Letters
, 6, 576-580 (2015)
"Ultrafast Twisting of the Indoline Donor Unit Utilized in Solar Cell Dyes: Experimental and Theoretical Studies"
Ahmed M. El-Zohry, Daniel Roca-Sanjuán, and Burkhard Zietz
Journal of Physical Chemistry C
, 119, 2249-2259 (2015)
"Excitation of Nucleobases from a Computational Perspective I: Reaction Paths"
A. Giussani, J. Segarra-Martí, D. Roca-Sanjuán, and M. Merchán
Topics in Current Chemistry
, 355, 57-97 (2015)
"A Surface Hopping Algorithm for Non-Adiabatic Minimum Energy Path Calculations"
I. Schapiro, D. Roca-Sanjuán, R. Lindh, and M. Olivucci
Journal of Computational Chemistry
, 36, 312-320 (2015)
"Recent method developments and applications in computational photochemistry, chemiluminescene and bioluminescence".
Daniel Roca-Sanjuán, Ignacio Fdez. Galván, Roland Lindh and Ya-Jun Liu,
In:
"Photochemistry". Series: Specialist Periodical Reports, Vol. 42, pp. 11-42,
Ed. A. Albini, Royal Society, London (2015)
2014
"A Theoretical Study of the Intramolecular Charge Transfer in 4-(dimethylamino)benzethyne"
J. Segarra-Martí and P. B. Coto
Physical Chemistry Chemical Physics
, 16, 25642-25648 (2014)
"Computational Determination of the Dominant Triplet Population Mechanism in Photoexcited Benzophenone"
D.-C. Sergentu, R. Maurice, R. W. A. Havenith, R. Broer, and D. Roca-Sanjuán
Physical Chemistry Chemical Physics
, 16, 25393-25403 (2014)
"Can the Hexagonal Ice-like Model Render the Spectroscopic Fingerprints of Structured Water? Feedback from Quantum-Chemical Computations"
J. Segarra-Martí, D. Roca-Sanjuán, and M. Merchán
Entropy
, 16, 4101-4120 (2014)
"Toward the Understanding of the Photophysics and Photochemistry of 1-Nitronaphthalene under Solar Radiation: The First Theoretical Evidence of a Photodegradation Intramolecular Rearrangement Mechanism Involving the Triplet States"
A. Giussani
The Journal of Chemical Theory and Computation
, 10, 3987-3995 (2014)
"Relaxation Mechanisms of 5-Azacytosine"
A. Giussani, M. Merchán, J. P. Gobbo, and A. C. Borin
The Journal of Chemical Theory and Computation
, 10, 3915-3924 (2014)
"Engineering Chemiluminescent Properties by Means of Non-Adiabatic Computational Chemistry"
D. Roca-Sanjuán, P. Farahani, A. Francés-Monerris, and R. Lindh
Luminescence. The Journal of Biological and Chemical Luminescence
, 29, 43 (2014)
Abstract of the "18th International Symposium on Bioluminescence and Chemiluminescence, ISBC2014", 23-28 June 2014, Uppsala, Sweden.
"CASPT2//CASSCF Study of the Ring-Opening Mechanism of Dewar Dioxetane"
P. Farahani, M. Lundberg, R. Lindh, and D. Roca-Sanjuán
Luminescence. The Journal of Biological and Chemical Luminescence
, 29, 18-19 (2014)
Abstract of the "18th International Symposium on Bioluminescence and Chemiluminescence, ISBC2014", 23-28 June 2014, Uppsala, Sweden.
"Towards the Understanding of the Larger Phosphorescence Quantum Yield than Fluorescence in Dioxetanone"
A. Francés-Monerris, D. Roca-Sanjuán, I. Fernández Galván, and R. Lindh
Luminescence. The Journal of Biological and Chemical Luminescence
, 29, 67-68 (2014)
Abstract of the "18th International Symposium on Bioluminescence and Chemiluminescence, ISBC2014", 23-28 June 2014, Uppsala, Sweden.
"A Two-scale Approach to Electron Correlation in Multiconfigurational Perturbation Theory"
P. Farahani, D. Roca-Sanjuán, and F. Aquilante
Journal of Computational Chemistry
, 35, 1609-1617 (2014)
Article Selected as Journal Cover
"A Theoretical Analysis of the Intrinsic Light-Harvesting Properties of Xanthopterin"
D. Roca-Sanjuán, I. Fdez. Galván, A. Giussani and R. Lindh
Computational and Theoretical Chemistry
, 1040-1041, 230-236 (2014)
"2-Thiouracil Deactivation Pathways and Triplet States Population"
J. P. Gobbo and A. C. Borin
Computational and Theoretical Chemistry
, 1040-1041, 195-201 (2014)
"Theoretical Study of the Hydroxyl Radical Addition to Uracil and Photochemistry of the Formed U6OH. Adduct"
A. Francés-Monerris, M. Merchán, and D. Roca-Sanjuán
Journal of Physical Chemistry B
, 118, 2932-2939 (2014)
See correction of TOC/Abstract graphic at DOI:
10.1021/jp5031043
"On the Hexagonal Ice-like Model of Structured Water: Theoretical Analysis of the Low-lying Excited States"
J. Segarra-Martí, D. Roca-Sanjuán and M. Merchán
Computational and Theoretical Chemistry
, 1040-1041, 266-273 (2014)
2013
"Computational photochemistry and chemiluminescence of biomolecules"
A. Francés-Monerris, M. Merchán and D. Roca-Sanjuán
In:
European Photochemistry Association Newsletters
Vol. 85, pp. 25-30 (2013)
"On the Population of Triplet Excited States of 6-Aza-2-Thiothymine"
J. P. Gobbo and A. C. Borin
The Journal of Physical Chemistry A
, 117, 5589-5596 (2013)
"Revisiting the Non-Adiabatic Process in 1,2-Dioxetane"
P. Farahani, D. Roca-Sanjuán, F. Zapata, and R. Lindh
The Journal of Chemical Theory and Computation
, 9, 5404-5411 (2013)
"Ketorolac beats Ketoprofen: lower photodecarboxylation, photohemolysis and phototoxicity"
C. McTiernan, C. Fasciani, M. González-Béjar, D. Roca-Sanjuán, E. Alarcón, and J. C. Netto-Ferreira
Medical Chemistry Communications
, 4, 1619-1622 (2013)
"Tuning the Photophysical Properties of
anti
-B
18
H
22
: Efficient Intersystem Crossing between Excited Singlet and Triplet States in New 4,4′-(HS)
2
-
anti
-B
18
H
20
"
V. Sauri, J. M. Oliva, D. Hnyk, J. Bould, J. Braborec, M. Merchán, P. Kub�t, I. C�sarov�, K. Lang, and M. G. S. Londesborough
Inorganic Chemistry
, 52, 9266-9274 (2013)
"Electronic UV-Vis Transient Spectra of the .OH Reaction Products of Uracil, Thymine, Cytosine, and 5,6-Dihydrouracil by Using the complete active space self-consistent field second-order perturbation (CASPT2//CASSCF) theory"
A. Francés-Monerris, M. Merchán, and D. Roca-Sanjuán
The Journal of Chemical Physics
, 139, 071101 (2013)
"Toward an Understanding of the Hydrogenation Reaction of MO
2
gas phase clusters (M = Ti, Zr, and Hf)"
P. González-Navarrete, M. Calatayud, J. Andrés, F. Ruipérez, and D. Roca-Sanjuán
The Journal of Physical Chemistry A
, 117, 5354�5364 (2013)
"Investigations on the synthesis and chemiluminescence of novel 2-coumaranones"
S. Schramm, D. Weiβ, I. Navizet, D. Roca-Sanjuán, H. Brandl, R. Beckert and H. G�rls
ARKIVOC
, Issue 3, 174-188 (2013)
"Are the Bio- and Chemiluminescence States of the Firefly Oxyluciferin the Same as the Fluorescence State?"
I. Navizet, D. Roca-Sanjuán, L. Yue, Y.-J. Liu, N. Ferré, and R. Lindh
Photochemistry and Photobiology
, 89, 319-325 (2013)
"Towards the Understanding at the Molecular Level of the Structured-Water Absorption and Fluorescence Spectra: A Fingerprint of π-Stacked Water"
J. Segarra-Martí, P. B. Coto, M. Rubio, D. Roca-Sanjuán, and M. Merchán
Molecular Physics
, 111, 1308-1315 (2013)
"Combined Theoretical and Experimental Study of the Photophysics of Asulam"
A. Giussani, R. Pou-Amérigo, L. Serrano-Andrés, A. Freire-Corbacho, C. Martínez-García, M
a
I. Fernández P., M. Sarakha, M. Canle L., and J. A. Santaballa
The Journal of Physical Chemistry A
, 117, 2125-2137 (2013)
"Photoinduced Formation Mechanism of the Thymine-Thymine (6-4) Adduct"
A. Giussani, L. Serrano-Andrés, M. Merchán, D. Roca-Sanjuán, and M. Garavelli
The Journal of Physical Chemistry B
, 117, 1999-2004 (2013)
"Proton/Hydrogen Transfer Mechanisms in the Guanine-Cytosine Base Pair: Photostability and Tautomerism"
V. Sauri, J. P. Gobbo, J. J. Serrano-Pérez, M. Lundberg, P. B. Coto, L. Serrano-Andrés, A. C. Borin, R. Lindh, M. Merchán, and D. Roca-Sanjuán
The Journal of Chemical Theory and Computation
, 9, 481-496 (2013)
2012
"Calculation of Excited States: Molecular Photophysics and Photochemistry on Display"
L. Serrano-Andr�s and J. J. Serrano-P�rez
In:
"Handbook of Computational Chemistry"
Springer-Verlag, Berlin, Heidelberg, pp. 483-560 (2012)
"On the Photophysics and Photochemistry of the Water Dimer"
J. Segarra-Mart�, D. Roca-Sanju�n, M. Merch�n, and R. Lindh
The Journal of Chemical Physics
, 137, 244309 (2012)
"On the N
1
�H and N
3
�H Bond Dissociation in Uracil by Low Energy Electrons: A CASSCF/CASPT2 Study"
I. Gonz�lez-Ram�rez, J. Segarra-Mart�, L. Serrano-Andr�s, M. Merch�n, M. Rubio, and D. Roca-Sanju�n
The Journal of Chemical Theory and Computation
, 8, 2769-2776 (2012)
"Ab initio determination of the ionization potentials of water clusters (H
2
O)(n) (n=2-6)"
J. Segarra-Mart�, M. Merch�n, and D. Roca-Sanju�n
The Journal of Chemical Physics
, 136, 244306 (2012)
"Progress and Challenges in the Calculation of Electronic Excited States"
L. Gonz�lez, D. Escudero, and L. Serrano-Andr�s
ChemPhysChem
, 13, 28-51 (2012)
"On the Deactivation Mechanisms of Adenine�Thymine Base Pair"
J. P. Gobbo, V. Sauri, D. Roca-Sanju�n, L. Serrano-Andr�s, M. Merch�n, and A. C. Borin
The Journal of Physical Chemistry B
, 116, 4089-4097 (2012)
"Distinct Photophysics of the Isomers of B
18
H
22
Explained"
M. G. S. Londesborough, D. Hnyk, J. Bould, L. Serrano-Andr�s, V. Sauri, J. M. Oliva, P. Kub�t, T. Pol�vka, and K. Lang
Inorganic Chemistry
, 51, 1471-1479 (2012)
2011
"Essential on the Photophysics and Photochemistry of the lndole Chromophore by Using a Totally Unconstrained Theoretical Approach"
A. Giussani, M. Merch�n, D. Roca-Sanju�n, and R. Lindh
Journal of Chemical Theory and Computation
, 7, 4088-4096 (2011)
"Two- and three-state conical intersections in the electron capture dissociation of disulfides: The importance of multireference calculations"
J. A. G�mez, L. Serrano-Andr�s, and M. Y��ez
International Journal of Quantum Chemistry
, 111, 3416-3323 (2011)
"On the role of the triplet state in the
cis/trans
isomerization of rhodopsin: A CASPT2//CASSCF study of a model chromophore"
R. Gonz�lez-Luque, G. Olaso-Gonz�lez, M. Merch�n, P. B. Coto, L. Serrano-Andr�s, and M. Garavelli
International Journal of Quantum Chemistry
, 111, 3431-3437 (2011)
"On the Relaxation Mechanisms of 6-Azauracil"
J. P. Gobbo, A. C. Borin, and L. Serrano-Andr�s
The Journal of Physical Chemistry
, 115, 6243-6251 (2011)
"Multiconfigurational Second-Order Perturbation Theory Restricted Active Space (RASPT2) Method for Electronic Excited States: A Benchmark Study"
V. Sauri, L. Serrano-Andr�s, A. R. M. Shahi, L. Gagliardi, S. Vancoille, and K. Pierloot
Journal of Chemical Theory and Computation
, 7, 153-168 (2011)
"On the Photoproduction of DNA/RNA Cyclobutane Pyrimidine Dimers"
I. Gonz�lez-Ram�rez, D. Roca-Sanju�n, T. Climent, J. J. Serrano-P�rez, M. Merch�n, and L. Serrano-Andr�s
Theoretical Chemistry Accounts
, 128, 705-711 (2011)
"A distance-dependent parameterization of the extended Hubbard model for conjugated and aromatic hydrocarbons derived from stretched ethene"
T. G. Schmalz, L. Serrano-Andr�s, V. Sauri, M. Merch�n, and J. M. Oliva
The Journal of Chemical Physics
, 135, 194103 (2011)
"Intramolecular charge transfer and dual fluorescence of 4-(dimethylamino)benzonitrile: ultrafast branching followed by a two-fold decay mechanism"
P. B. Coto, L. Serrano-Andr�s, T. Gustavsson, T. Fujiwara, and E. C. Lim
Physical Chemistry Chemical Physics
, 13, 15182-15188 (2011)
"Organic Spectroscopy Under Bj�rn O. Roos"
L. Serrano-Andr�s
International Journal of Quantum Chemistry
, 111, 3284-3290 (2011)
"In Remembrance of Dr. Luis Serrano-Andr�s"
M. Merch�n
International Journal of Quantum Chemistry
, 111, 3261-3262 (2011)
"Molecular Basis of the Phototherapy of Furocoumarins: A Theoretical Study".
L. Serrano-Andr�s and J. J. Serrano-P�rez.
In:
"Psoriasis: Causes, Diagnosis and Treatment".
Ed. J. A. Carrasco. Nova Science Publishers (2011), pp. 1-61
"Recent Trends in Computational Photochemistry".
L. Serrano-Andr�s, D. Roca-Sanju�n, and G. Olaso-Gonz�lez,
In:
"Photochemistry". Series: Specialist Periodical Reports, Vol. 38, pp. 10-36,
Ed. A. Albini, Royal Society, London (2011)
2010
"On the Electronic Structure of H-Ng-Ng-F (Ng = Ar, Kr, Xe) and the Nonlinear Optical Properties of HXe
2
F"
A. Avramopoulos, L. Serrano-Andr�s, J. Li, and G. Papadopoulos
Journal of Chemical Theory and Computation
, 6, 3365-3372 (2010)
"MOLCAS 7: The Next Generation" .
F. Aquilante, L. De Vico, N. Ferr�, G. Ghigo, P-.A. Malmqvist, T. Pedersen, M. Pitonak, M. Reiher, B. O. Roos, L. Serrano-Andr�s, M. Urban, V. Veryazov, and R. Lindh,
Journal of Computational Chemistry
, 31, 224-247 (2010)
Article Selected as Journal Cover
"Modeling Hole Transfer in DNA. II. Molecular Basis of Charge Transport in the DNA Chain"
D. Roca-Sanju�n, G. Olaso-Gonz�lez, P. B. Coto, M. Merch�n, and L. Serrano-Andr�s
Theoretical Chemistry Accounts
, 126, 177-183 (2010)
"Electron Capture Activation of the Disulfide Bond. The Role of Asymmetry and Electronegativity"
J. A. G�mez, M. Y��ez, and L. Serrano-Andr�s
Physical Chemistry Chemical Physics
, 12, 1042-1050 (2010)
"Ultrafast Decay of the Excited Singlet States of Thioxanthone by Internal Conversion and Intersystem Crossing"
G. Angulo, J. Grilj, E. Vauthey, L. Serrano-Andr�s, O. Rubio-Pons, and P. Jacques
ChemPhysChem
, 11, 480-488 (2010)
"Calibration of Cholesky Auxiliary Basis Sets for Multiconfigurational Perturbation Theory Calculations of Excitation Energies"
J. Bostr�m, M. G. Delcey, F. Aquilante, L. Serrano-Andr�s, T. B. Pedersen, and R. Lindh
Journal of Chemical Theory and Computation
,6, 747-754 (2010)
"Photophysics and Photostability of Adenine in Aqueous Solution: A Theoretical Study".
V. Ludwig, Z. M. Da Costa, M. S. Do Amaral, A. C. Borin, S. Canuto, and L. Serrano-Andr�s,
Chemical Physics Letters
, 492, 164-169 (2010)
"Singlet-Triplet States Interaction Regions in DNA/RNA Nucleobase Hypersurfaces".
R. Gonz�lez-Luque, T. Climent, I. Gonz�lez-Ram�rez, M. Merch�n, and L. Serrano-Andr�s,
Journal of Chemical Theory and Computation
, 6, 2103-2114 (2010)
"Cyclobutane Pyrimidine Photodimerization of DNA/RNA Nucleobases in the Triplet State".
T. Climent, I. Gonz�lez-Ram�rez, R. Gonz�lez-Luque, M. Merch�n, and L. Serrano-Andr�s,
The Journal of Physical Chemistry Letters
, 1, 2072-2076 (2010)
"Thioxanthone: On the Shape of the First Absorption Band".
V. Rai-Constapel, M. Kleinschmidt, S. Salzmann, L. Serrano-Andr�s, and C. M. Marian,
Physical Chemistry Chemical Physics
, 12, 9320-9327 (2010)
"Asymmetry and Non-Adiabaticity in Fragmentation of Disulfide Bonds upon Electron Capture".
J. A. G�mez, L. Serrano-Andr�s, and M. Y��ez
ChemPhysChem
, 11, 2530-2538 (2010)
"Energy Landscapes in Diexo and Endo,Exo Isomers Derived from Li
2
B
12
H
12
".
J. M. Oliva, A. Fernández-Barbero, L. Serrano-Andrés, M. Canle-L., J. A. Santaballa, and M. I. Fernández
Chemical Physics Letters
, 497, 172-177 (2010)
"Theoretical Investigations of the IR Spectroscopy of Ni (C
2
S
2
H
2
)
2
. A Case Study of the P_VMWCI
2
Algorithm Including Anharmonic Effects".
D. Bégué, P. Labéguerie, D. Y. Zhang-Negrerie, A. Avramopoulos, L. Serrano-Andrés, and M. Papadopoulos
Physical Chemistry Chemical Physics
, 12, 13746-13751 (2010)
2009
"Are the Five Natural DNA/RNA Base Monomers a Good Choice from Natural Selection? A Photochemical Perspective".
L. Serrano-Andrés and M. Merchán
Journal of Photochemistry and Photobiology C: Photochemistry Reviews
, 10, 21-32 (2009)
"The Role of Adenine Excimers in the Photophysics of Oligonucleotides".
G. Olaso-González, M. Merchán, and L. Serrano-Andrés
Journal of the American Chemical Society
, 131, 4368-4677 (2009)
"Electrostatic Control of the Photoisomerization Efficiency and Optical Properties in Visual Pigments: on the Role of Counterion Quenching".
G. Tomasello, G. Olaso-González, P. Altoè, M. Stenta, L. Serrano-Andrés, M. Merchán, G. Orlandi, A. Bottoni, and M. Garavelli
Journal of the American Chemical Society
, 131, 5172-5186 (2009)
"Determination of the Electron-Detachment Energies of 2'-Deoxyguanosine 5'-Monophosphate Anion: Influence of the Conformation".
M. Rubio, D. Roca-Sanjuán, L. Serrano-Andrés, and M. Merchán
The Journal of Physical Chemistry B
, 113, 2451-2457 (2009)
"The Role of Pyrimidine Nucleobases Excimers in DNA Photoreactivity".
I. González-Ramírez, T. Climent, J. J. Serrano-Pérez, R. González-Luque, M. Merchán, and L. Serrano-Andrés
Pure & Applied Chemistry
, 81, 1695-1705 (2009)
"DNA Nucleobases Properties and Photoreactivity: Modeling Environmental Effects".
D. Roca-Sanjuán, Gloria Olaso-González, M. Rubio, P. B. Coto, M. Merchán, N. Ferré, V. Ludwig, and L. Serrano-Andrés
Pure & Applied Chemistry
, 81, 743-754 (2009)
"Design of Carborane Molecular Architectures with Electronic Strucuture Calculations: From Endohedral and Polyradical Systems to Multidimensional Networks".
J. M. Oliva, D. Klein, P. v. R. Schleyer, and L. Serrano-Andrés,
Pure & Applied Chemistry
, 81, 719-729 (2009)
"On the Electronic Structure of a Dianion, a Radical Anion, and a Neutral Biradical Carborane Dimer" .
J M. Oliva, L. Serrano-Andrés, Z. Havlas, and J. Michl,
Journal of Molecular Structrure, Theochem
, 912, 13-20 (2009)
"Singlet Oxygen Generation in PUVA Therapy Studied using Electronic Structure Calculations".
J. J. Serrano-Pérez, G. Olaso-González, M. Merchán, and L. Serrano-Andrés,
Chemical Physics
, 360, 85-96 (2009)
"Deciphering Intrinsic Deactivation/Isomerization Routes in a Phytochrome Chromophore Model".
P. Altoè, T. Climent, G. De Fusco, M. Stenta, A. Botoni, L. Serrano-Andrés, M. Merchán, G. Orlandi, and M. Garavelli,
The Journal of Physical Chemistry B
, 113, 15067-15073 (2009)
Article Selected as Journal Cover
"Do Fluorescence and Transient Absorption Probe the Same Intramolecular Charge Transfer State of 4-(Dimethylamino)benzonitrile?".
T. Gustavsson, P. B. Coto, L. Serrano-Andrés, T. Fujiwara, and E. C. Lim,
Journal of Chemical Physics
, 131, 031101 (2009)
Article Selected as Journal Cover
"Linear and Nonlinear Optical Properties of a Series of Ni-dithiolene Derivatives".
L. Serrano-Andrés, A. Avramopoulos, J. Li, P. Labéguerie, D. Bégué, V. Kellö, and M. G. Papadopoulos,
Journal of Chemical Physics
. 131, 134312 (2009)
"Towards Understanding the Photochemistry of Photoactive Yellow Protein: A CASPT2/CASSCF and Quantum Theory of Atoms in Molecules Combined Study of a Model Chromophore in vacuo".
P. B. Coto, D. Roca-Sanjuán, L. Serrano-Andrés, A. M. Pendás. S. Martí, and J. Andrés,
Journal of Chemical Theory and Computation
, 5, 3032-3038 (2009)
"Photophysics of 1-Aminonaphthalene: a Theoretical and Time-Resolved Experimental Study".
R. Montero, A. Longarte, Á. Peralta-Conde, F. Castaño, I. González-Ramírez, A. Giussani, L. Serrano-Andrés, and M. Merchán,
Journal of Physical Chemistry A
, 113, 13509-13518 (2009)
"Design of Carborane Molecular Architectures with Electronic Structure Calculations".
J. M. Oliva, L. Serrano-Andrés, D. J. Klein, P. v. R. Schleyer, and J. Michl,
International Journal of Photoenergy
, 2009, 292393 (2009)
2008
"A Three-State Model for the Photophysics of Guanine".
L. Serrano-Andrés, M. Merchán, and A. C. Borin
Journal of the American Chemical Society
. 130, 2473-2484 (2008)
"Photostability and Photoreactivity in Biomolecules: Quantum Chemistry of Nucleic Acid Base Monomers and Dimers".
L. Serrano-Andrés and M. Merchán.
In:
"Radiation Induced Molecular Phenomena in Nucleic Acid: A Comprehensive Theoretical and Experimental Analysis".
Eds. M. K. Shukla and J. Leszczynski, Springer, The Netherlands, Chapter 16, pp 435-472 (2008)
"Excited States of the Water Molecule: Analysis of the Valence and Rydberg Character".
M. Rubio, L. Serrano-Andrés, and M. Merchán
Journal of Chemical Physics
, 128, 104305-1-12 (2008)
Relationship between the Excited State Relaxation Paths of Rhodopsin and Isorhodopsin".
A. Strambi, P. B. Coto, L. M. Frutos, N. Ferré, and M. Olivucci
Journal of the American Chemical Society
, 130, 3382-3388 (2008)
"Toroidal Electric Ring Currents and Magnetic Fields in Oriented Linear Molecules
Induced by Circularly Polarized Laser Pulses: Quantum Ab Initio Simulations for AlCl".
I. Barth, J. Manz, and L. Serrano-Andrés
Chemical Physics
, 347, 263-271 (2008)
"Photosensitization and Phototherapy with Furocoumarins: a Quantum Chemical Study".
J. J. Serrano-Pérez, M. Merchán, and L. Serrano-Andrés
Chemical Physics
, 347, 422-435 (2008)
"Effect of Opsin on the Shape of the Potential Energy Surface at the Conical Instersection of the Rhodopsin Chromophore".
P. B. Coto, A. Strambi, and M. Olivucci
Chemical Physics
, 347, 483-491 (2008)
"Modeling Hole Transfer in DNA: Low-lying Excited States of Oxidized Cytosine Homodimer and Cytosine-Adenine Heterodimer".
D. Roca-Sanjuán, M. Merchán, and L. Serrano-Andrés
Chemical Physics
, 349, 188-196 (2008)
"On the Effect of Radical Character, Substitution, and Atom Encapsulation on the Volume of Icosahedral (Car)boranes"
D. J. Klein, J. I. Burgos, L. Serrano-Andrés, and J. M. Oliva
Afinidad LXV
, 533, 32-38 (2008)
"Origin of the Absorption Maxima of the Photoactive Yellow Protein resolved via ab initio Multiconfigurational Methods".
P. B. Coto, S. Martí, M. Oliva, M. Olivucci, M. Merchán, and J. Andrés
Journal of Physical Chemistry B
. 112, 7153-7156 (2008)
"Molecular Basis of DNA Photodimerization: Intrinsic Production of Cyclobutane Cytosine Dimers".
D. Roca-Sanjuán, G. Olaso-González, I. González-Ramírez, L. Serrano-Andrés, and M. Merchán
Journal of the American Chemical Society
. 130, 10768-10779 (2008)
"The Family of Furocoumarins: Looking For the Best Photosensitizer for Phototherapy".
J. J. Serrano-Pérez, R. González-Luque, M. Merchán, and L. Serrano- Andrés
Journal of Photochemistry and Photobiology A: Chemistry
. 199, 34-41 (2008)
"What Electronic Structures and Geometries of Carborane Mono- and ortho-, meta-, and para-Diradicals are Preferred?".
L. Serrano-Andrés, D. Klein, P. v. R. Schleyer, and J. M. Oliva
Journal of Chemical Theory and Computation
. 4, 1338-1347 (2008)
"Ab Initio Determination of the Electron Affinities of DNA and RNA Nucleobases".
D. Roca-Sanjuán, M. Merchán, L. Serrano-Andrés, and M. Rubio
Journal of Chemical Physics
. 129, 095104 (2008)
"2-Aminopurine Nonradiative Decay and Emission in Aqueous Solution: A Theoretical Study".
V. Ludwig, M. S. Amaral, Z. M. Costa, A. C. Borin, S. Canuto, and L. Serrano-Andrés
Chemical Physics Letters
. 463, 201-205 (2008)
"Nonadiabatic Orientation, Toroidal Current, and Induced Magnetic Field in BeO Molecules".
I. Barth, L. Serrano-Andrés, and T. Seideman
Journal of Chemical Physics
. 129, 164303-1,12 (2008)
"Photoreactivity of Furocoumarins and DNA in PUVA Therapy: Formation of Psoralen-Thymine Adducts".
J. J. Serrano-Pérez, M. Merchán, and L. Serrano-Andrés
Journal of Physical Chemistry B
. 112, 14002-14010 (2008)
"Theoretical Insight into the Intrinsic Ultrafast Formation of Cyclobutane Pyrimidine Dimers in UV-Irradiated DNA: Thymine versus Cytosine".
J. J. Serrano-Pérez, I. González-Ramírez, P. B. Coto, M. Merchán, and L. Serrano-Andrés
Journal of Physical Chemistry B
. 112, 14096-14098 (2008)
"Rydberg or Valence? The Long-Standing Question in the UV-Absorption Spectrum of 1,1'-Bicyclohexyliden".
G. Pérez-Hernández, L. González, and L. Serrano-Andrés
ChemPhysChem
. 9, 2544-2549 (2008)
2007
"Linear and Nonlinear Optical Properties of Some Organo-Xenon Derivatives".
A. Avramopoulos, L. Serrano-Andrés, J. Li, H. Reis, and M. G. Papadopoulos,
Journal of Chemical Physics
. 127, 214102 (2007)
"Bioexcimers as Precursors of Charge Transfer and Reactivity in Photobiology".
L. Serrano-Andrés, M. Merchán, D. Roca-Sanjuán, G. Olaso-González, and M. Rubio
AIP Conference Proceedings
. 963, 526-532 (2007)
"Ultrafast Electron Transfer in Photosynthesis: Reduced Pheophytin and Quinone Interaction Mediated by Conical Intersections".
G. Olaso-González, M. Merchán, and L. Serrano-Andrés
AIP Conference Proceedings
. 963, 706-709 (2007)
"Toward an Understanding of the Spectral Tuning in Rhodopsin".
G. Olaso-González, G. Tomasello, P. Altoe, M. Stenta, L. Serrano-Andrés, M. Merchán, and M. Garavelli
AIP Conference Proceedings
. 963, 710-712 (2007)
"Retinal Photoisomerization in Rhodopsin: Electrostatic and Steric Catalysis".
G. Tomasello, P. Altoe, G. Olaso-González, M. Garavelli, and G. Orlandi
AIP Conference Proceedings
. 963, 727-730 (2007)
"MOLCAS 7.0. A Quantum Chemistry Package".
K. Andersson, F. Aquilante, M. Barysz, E. Bednarz, A. Bernhardsson, M. R .A. Blomberg, Y. Carissan, D. L. Cooper, M. Cossi, A. Devarajan, L. De Vico, N. Ferré, M. P. Fülscher, A. Gaenko, L. Gagliardi, G. Ghigo, C. de Graaf, B. A. Hess, D. Hagberg, A. Holt, G. Karlström, J. W. Krogh, R. Lindh, P.-A. Malmqvist, T. Nakajima, P. Neogrády, J. Olsen, T. B. Pedersen, J. Raab, M. Reiher, B. O. Roos, U. Ryde, B. Schimmelpfennig, M. Schütz, L. Seijo, L. Serrano-Andrés, P. E. M. Siegbahn, J. Stalring, T. Thorsteinsson, V. Veryazov, P.-O. Widmark, and A. Wolf.,
University of Lund, Lund, Sweden
. (2007)
"On the Intrinsic Population of the Lowest Triplet State of Thymine".
J. J. Serrano-Pérez, R. González-Luque, M. Merchán, and L. Serrano-Andrés,
Journal of Physical Chemistry B
. 111, 11880-11883 (2007)
"Ultrafast Electron Transfer in Photosynthesis: Reduced Pheophytin and Quinone Interaction Mediated by Conical Intersections".
G. Olaso-González, M. Merchán, and L. Serrano-Andrés
Photosynthesis Research
. 91, 199-199 PS548 (2007)
"What is the Limit of Atom Encapsulation for Icosahedral Carboranes?".
V. Manero, J. M. Oliva, L. Serrano-Andrés, and D. J. Klein
Journal of Chemical Theory and Computation
. 3, 1399-1404 (2007)
"On the Intrinsic Population of the Lowest Triplet State of Uracil".
T. Climent, R. González-Luque, M. Merchán, and L. Serrano-Andrés,
Chemical Physics Letters
. 441, 327-331 (2007)
"Hydrogen transfer versus Proton Transfer in 7-Hydroxyquinoline (NH
3
)
3
. A CASSCF/CASPT2 Study"
A. Fernández-Ramos, E. Martínez-Núñez, S. A. Vázquez, M. A. Ríos, C. Estévez, M. Merchán, and L. Serrano-Andrés
Journal of the Physical Chemistry A
. 111, 5907-5912 (2007)
About the Intrinsic Photochemical Properties of the 11-cis Retinal Chromophore: Computational Clues for a Trap State and a Lever Effect in Rhodopsin Catalysis".
A. Cembran, R. González-Luque, L. Serrano-Andrés, M. Merchán, and M. Garavelli
Theoretical Chemistry Accounts
. 118, 173-183 (2007)
"Quantum Chemical Study on the Population of the Lowest Triplet State of Psoralen".
J. J. Serrano-Pérez, M. Merchán, and L. Serrano-Andrés
Chemical Physics Letters
. 434, 107-110 (2007)
2006
"Adenine and 2-Aminopurine: Paradigms of Modern Theoretical Photochemistry".
L. Serrano-Andrés, M. Merchán, and A. C. Borin.
Proceedings of the National Academy of Sciences USA
, 103, 8691-8696 (2006)
"A Three-State Model for the Photophysics of Adenine".
L. Serrano-Andrés, M. Merchán, and A. C. Borin.
Chemistry. A European Journal
, 12, 6559-6571 (2006)
"Determination of the Lowest-Energy Oxidation Site in Nucleotides: 2'-Deoxythymidine 5'-Monophosphate Anion".
M. Rubio, D. Roca-Sanjuán, M. Merchán, and L. Serrano-Andrés.
Journal of Physical Chemistry B
, 110, 10234-10235 (2006)
"A Theoretical Insight into the Photophysics of Psoralen".
J. J. Serrano-Pérez, L. Serrano-Andrés, and M. Merchán,
Journal of Chemical Physics
, 124, 124502-1-7 (2006)
"Ab Initio Determination of the Ionization Potentials of DNA and RNA Nucleobases".
D. Roca-Sanjuán, M. Rubio, M. Merchán, and L. Serrano-Andrés.
Journal of Chemical Physics
. 125, 084302-1-7 (2006)
"Theoretical CASPT2 Study of the Excited State Double Proton Transfer Reaction in the 7-Azaindole Dimer".
L. Serrano-Andrés and M. Merchán,
Chemical Physics Letters
, 418, 569-575 (2006)
"Theoretical Absorption and Emission Spectra of 2-Aminopurine in Vapor and in Water".
A. C. Borin, L. Serrano-Andrés, V. Ludwig, K. Coutinho, and S. Canuto.
International Journal of Quantum Chemistry
. 106, 2564-2577 (2006)
"A Computational Study of the Lowest Singlet and Triplet States of Neutral and Dianionic 1,2-Substituted Icosahedral and Octahedral o-Carboranes".
J. M. Oliva and L. Serrano-Andrés,
Journal of Computational Chemistry
, 27, 524-535 (2006)
"A Butterfly-like Motion as a Clue to the Photophysics of Thioxanthone".
O. Rubio-Pons, L. Serrano-Andrés, D. Burget, and P. Jacques,
Journal of Photochemistry and Photobiology A: Chemistry
, 179, 298-304 (2006)
"Is the CH
2
OH + O
2
--> CH
2
=O + HO
2
Reaction Barrierless? An Ab Initio Study on the Reaction Mechanism".
V. M. Ramírez-Ramírez, L. Serrano-Andrés, and I. Nebot-Gil,
Theoretical Chemistry Accounts
, 116, 637-640 (2006)
"Photochemical Window Mechanism for Atom Release in Carborane Endohedral Boxes: Theoretical Evidence".
L. Serrano-Andrés and J. M. Oliva
Chemical Physics Letters
, 432, 235-239 (2006)
"Propiedades Fotofísicas del Psoraleno".
J. J. Serrano-Pérez, L. Serrano-Andrés, and M. Merchán,
Boletín del Grupo Español de Fotobiología
. 19, 1-3 (2006)
"Ultrafast Electron Transfer in Photosynthesis: Reduced Pheophytin and Quinone Interaction Mediated by Conical Intersections".
G. Olaso-González, M. Merchán, and L. Serrano-Andrés.
Journal of Physical Chemistry B
, 110, 24734-24739 (2006)
"Theoretical Insight into the Spectroscopy and Photochemistry of Isoalloxazine, the Flavin Core Ring".
T. Climent, R. González-Luque, M. Merchán, and L. Serrano-Andrés.
Journal of Physical Chemistry A
, 110, 13584-13590 (2006)
"Toward the Understanding of DNA Fluorescence: The Singlet Excimer of Cytosine".
G. Olaso-González, D. Roca-Sanjuán, L. Serrano-Andrés, and M. Merchán.
Journal of Chemical Physics
, 125, 231102-1-4 (2006)
"Unified Model for the Ultrafast Decay of Pyrimidine Nucleobases".
M. Merchán, R. González-Luque, T. Climent, L. Serrano-Andrés, E. Rodríguez, M. Reguero, and D. Peláez.
Journal of Physical Chemistry B
, 110, 26471-26476 (2006)
2005
"Ab Initio Methods for Excited States".
M. Merchán and L. Serrano-Andrés,
In:
"Computational Photochemistry".
Ed. M. Olivucci, Elsevier, Amsterdam (2005) Vol. 16, pp. 35-91.
"Computation of Conical Intersections by Using Perturbation Techniques".
L. Serrano-Andrés, M. Merchán, and R. Lindh,
Journal of Chemical Physics
, 122, 104107-1-10 (2005)
"Triplet-State Formation Along the Ultrafast Decay of Excited Singlet Cytosine".
M. Merchán, L. Serrano-Andrés, M. A. Robb, and L. Blancafort
Journal of the American Chemical Society
, 127, 1820-1825 (2005)
"On the Low-lying Excited States of sym-Triazine-Based Herbicides".
J. M. Oliva, M. E. D. G. Azenha, H. D. Burrows, R. Coimbra, J. S. Seixas de Melo, M. Canle L., M. I. Fernández, J. A. Santaballa, and L. Serrano-Andrés
ChemPhysChem
, 6, 306-314 (2005)
"Quantum Chemistry of the Excited State: 2005 Overview".
L. Serrano-Andrés and M. Merchán
Journal of Molecular Structure, Theochem
, 729, 99-108 (2005)
"Theoretical study of the electronic excited states of tetracyanoethylene and its radical anion".
B. Milián, R. Pou-Amérigo, M. Merchán, and E. Ortí
ChemPhysChem
, 6, 503-510 (2005)
"A Theoretical Study on the Low-lying Excited States of 2,2':5',2''-Terthiophene and 2,2':5',2'':5'',2'''- Quaterthiophene".
M. Rubio, M. Merchán, and E. Ortí
ChemPhysChem
, 6, 1357-1368 (2005)
"Structure, Spectroscopy, and Spectral Tuning of the Gas-phase Retinal Chromophore: The Beta-Ionone 'Handle' and Alkyl Group Effect".
A. Cembran, R. González-Luque, P. Altoe, M. Merchán, F. Bernardi, M. Olivucci, and M. Garavelli
Journal of Physical Chemistry A
, 109, 6597-6605 (2005)
2004
"Spectroscopy: Applications".
L. Serrano-Andrés and M. Merchán
In:
"Encyclopedia of Computational Chemistry"
Eds. P. v. R. Schleyer, W. L. Jorgensen, H. F. Schaeffer III, P. R. Schreiner, W. Thiel, and R. Glen, Wiley, Chichester (2004)
"Vida y Luz: Una Perspectiva Químico-Cuántica".
L. Serrano-Andrés and M. Merchán
Anales de Química
, 100 (3), 16-31 (2004)
"A theory of nonvertical triplet energy transfer in terms of accurate potential energy surfaces: The transfer reaction from pi,pi* triplet donors to 1,3,5,7- cyclooctatetraene"
L. M. Frutos, O. Castaño, J. L. Andrés, M. Merchán, and A. U. M. Acuña
Journal of Chemical Physics
, 120, 1208-1216 (2004)
"Multiconfigurational Second-Order Perturbation Study of the Decomposition of the Radical Anion of Nitromethane"
J. F. Arenas, J. C. Otero, D. Peláez, J. Soto, and L. Serrano-Andrés
Journal of Chemical Physics
, 121, 4127-4132 (2004)
"MOLCAS as a Development Platform for Quantum Chemical Applications"
V. Veryazov, P. -O. Widmark, L. Serrano-Andrés, R. Lindh, and B. O. Roos
International Journal of Quantum Chemistry
, 100, 626-635 (2004)
"MOLCAS Version 6.0. A quantum chemistry package".
K. Andersson, M. Baryz, A. Bernhardsson, M. R. A. Blomberg, Y. Carissan, D. L. Cooper, M. Cossi, M. P. Fülscher, L. Gagliardi, C. de Graaf, B. Hess, G. Karlström, J. Krogh, R. Lindh, P.-A. Malmqvist, T. Nakajima, J. Olsen, J. Raab, B. O. Roos, B. Schimmelpfennig, M. Schütz, L. Seijo, L. Serrano-Andrés, P. E. Siegbahn, J. Stalring, T. Thorsteinsson, V. Veryazov, and P.-O. Widmark,
"MOLCAS Version 6.0. Tutorials and Examples".
L. Serrano-Andrés and N. W. Moriarty,
Dept. of Theor. Chem., Univ. of Lund, P.O.B. 124, S-221 00 Lund, Sweden, 2004
2003
"Ultrafast Internal Conversion of Excited Cytosine via the Lowest pipi* Electronic Singlet State"
M. Merchán and L. Serrano-Andrés
Journal of the American Chemical Society
, 125, 8108-8109 (2003)
"Theoretical determination of the singlet -> singlet and singlet -> triplet electronic spectra, lowest ionization potentials, and electron affinity of cyclooctatetraene"
L. M. Frutos, O. Castaño, and M. Merchán
Journal of Physical Chemistry A
, 107, 5472-5478 (2003)
"Theoretical analysis of the excited states in maleimide"
T. Climent, R. González-Luque, and M. Merchán
Journal of Physical Chemistry A
, 107, 6995-7003 (2003)
"A Theoretical Analysis of the Excited States in 2-Benzoylthiophene"
R. González-Luque, M. Merchán, M. Rubio, L. Serrano-Andrés, B. O. Roos, and M. A. Miranda
Molecular Physics
, 101, 1977-1982 (2003)
"The Electronic Spectra of Aryl Olefines: A Theoretical Study of Phenylacetylene"
L. Serrano-Andrés, M. Merchán, and M. Jablonski
Journal of Chemical Physics
, 119, 4294-4304 (2003)
"Theoretical Characterization of the Absorption Spectrum of Phenanthrene and its Cation"
R. González-Luque, L. Serrano-Andrés, M. Merchán, and M. P. Fülsher
Theoretical Chemistry Accounts
, 110, 224-232 (2003)
"Theoretical Absorption and Emission Spectra of 1H- and 2H- Benzotriazole"
A. C. Borin, L. Serrano-Andrés, V. Ludwig, and S. Canuto
Physical Chemistry Chemical Physics
, 5, 5001-5009 (2003)
"An ab initio study on the mechanism of the atmospheric reaction NH2+O-3 -> H2NO+O-2"
J. Peiró-García, I. Nebot-Gil, and M. Merchán
ChemPhysChem
, 4, 366-372 (2003)
"The low-lying excited states of 2,2 '-bithiophene: A theoretical analysis"
M. Rubio, M. Merchán, R. Pou-Amérigo, and E. Ortí
ChemPhysChem
, 4, 1308-1315 (2003)