A single viral plaque was isolated and re-plated to isolate new plaques (2).  The consensus sequence of gene NS (L = 849, Ts = 849 ´ 3 = 2547) was obtained for the parental and derived plaques after two amplification passages by direct sequencing of the purified RNA:  3fs / Ts = 7.6 ´ 10-5 and c = 5.  Hence, from Equation 5, min[ms/n/c] = 7.6 ´ 10-5 / 5 = 1.5 ´ 10-5 whereas no max[ms/n/c] can be obtained because mutation sampling was selective.  The estimated selection correction factor using the exponential plus lethal class model with E(sv) = 0.12, pL = 0.3, c = 5, selective sampling, and B » 50 as estimated in another work (1) is a = 0.33 (Figure 1)  Thus, ms/n/c = 1.5 ´ 10-5 / 0.33 = 4.5 ´ 10-5.

 

 

    1.    Nobusawa, E. and K. Sato. 2006. Comparison of the mutation rates of human influenza A and B viruses. J Virol. 80:3675-3678.

    2.    Parvin, J. D., A. Moscona, W. T. Pan, J. M. Leider, and P. Palese. 1986. Measurement of the mutation rates of animal viruses: influenza A virus and poliovirus type 1. J Virol. 59:377-383.