VICENTE ARNAU LLOMBART
PDI-Titular d'Universitat
Director/a Titulacio Master Oficial
Knowledge area: COMPUTER ARCHITECTURE AND TECHNOLOGY
Department: Computer Science
Despacho 2.3.32. ETSE. Avenida de la Universidad s/n. CP: 46100 Burjasot (Valencia).
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I2SysBio. Parque Científico de la UV. Despacho B12.
(9635) 43061
Biography
Degree in Physical Sciences, specializing in Electricity, Electronics and Computer Science from the University of Valencia. Doctorate in Physical Sciences in July 1993. I am Professor of Computer Architecture and Technology in the Computer Science Department of the Higher Technical School of Engineering (ETSE-UV). Since its creation in 2012 to the present, I am the director of the Master's Degree in Bioinformatics at the UV. I have taught classes in 3 subjects of this master's degree. I have been the director of 44 final master's projects (TFM), of which 3 have obtained the extraordinary prize for the best TFM of the course. I have participated in research projects on different topics: artificial vision, robotics, image processing, ophthalmology, optics and computer networks. Currently my main line of research is Bioinformatics. I have made programs for the analysis of NGS (Next Generation Sequencing) and Protein Interaction Network data. I have collaborated in the development of web applications for the analysis and visualization of bioinformatics data. I have 4 publications in Bioinformatics and 5 in BMC Bioinformatics. Since its fundation in March 2016, I have been a member of the Institute for Integrative Systems Biology (I2SysBio, UV-CSIC). I belong to the TBC, Theory, Bioinformatics and Computing research group (https://www.i2sysbio.es/groups/26/), where I carry out metagenomics studies applied to extremophile systems, environmental samples and also the human microbiome. I develop algorithms for the analysis of large volumes of bioinformatics data..
Subjects taught and teaching methods
Journal Publications
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V. ARNAU, I. MARÍN
(2004)
Fast analysis of highly repetitive sequences in human chromosomes using a novel search algorithm. WSEAS Transactions in Biology and Biomedicine, 1, pp. 107 - 111
. ISSN: 1109-9518
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J. Ignasi Lucas, Vicente Arnau, Ignacio Marín
(2006)
Comparative genomics and protein domain graph analyses link ubiquitination and RNA metabolism. Journal of Molecular Biology, 357, pp. 9 - 17
. ISSN: 0022-2836
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M. J. Maldonado, V. Arnau, R. Martínez-Costa, A. Navea, F. M. Micó, A. L. Cisneros, J. L. Menezo
(1997)
Reproducibility of digital image analysis for measuring corneal haze after myopic photorefractive keratectomy. American Journal of Ophthalmology, 123(1), pp. 31 - 41
. ISSN: 0002-9394
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M. J. Maldonado, V. Arnau, A. Navea, R. Martínez-Costa, F. M. Micó, A. L. Cisneros, J. L. Menezo
(1996)
Direct objective quantification of corneal haze following excimer laser photorefractive keratectomy for high myopia. Ophthalmology, 103, pp. 1970 - 1978
. ISSN: 0161-6420
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A.Palomares, A.Lorente, V. Arnau, F Martínez Verd, J.M.Articas
(1997)
A new method for the optimum generation of real colors on CRT monitors. Journal Of Optics, 28, pp. 107 - 111
. ISSN: 2040-8978
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V. ARNAU, I. MARIN
(2003)
A hierarchical clustering strategy and its application to proteomic interaction data. Lecture Notes in Computer Science, 2652, pp. 62 - 69
. ISSN: 0302-9743
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Vicente Arnau, Juan Manuel Orduña, Salvador Moreno, Rodrigo Valero, Aurelio Ruiz
(2000)
A Clustering Approach for Improving Network Performance in Heterogeneous Systems. Lecture Notes in Computer Science, 1900, pp. 1206 - 1209
. ISSN: 0302-9743
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Hafez, AI; Soriano, B.; Elsayed, AA; Futami, R.; Ceprián, R.; Ramos-Ruiz, R.; Martínez, G.; Roig, FJ; Torres-Font, MA; Naya-Catala, F.; Calduch-Giner, JA; Trilla-Fuertes, L.; Gámez-Pozo, A.; Arnau, V.; Sempere-Luna, JM; Pérez-Sánchez, J.; Gabaldón, T.; Llorens, C.
(2023)
Client Applications and Server-Side Docker for Management of RNASeq and/or VariantSeq Workflows and Pipelines of the GPRO Suite. Genes, 14(267), pp. 1 - 20
. ISSN: 2073-4425 -
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Arnau, Vicente; Díaz-Villanueva, Wladimiro; Mifsut Benet, Jorge; Villasante, Paula; Beamud, Beatriz; Mompó, Paula; Sanjuan, Rafael; González-Candelas, Fernando; Domingo-Calap, Pilar; Dzunková, Mária
(2023)
Inference of the life cycle of environmental phages from genomic signature distances to their hosts. Viruses, 15(5), p. 1196
. ISSN: 1999-4915 -
Mária D¿unková; James J. La Clair; Tomá¿ Tyml; Devin Doud; Frederik Schulz; Samuel Piquer-Esteban; Dafne Porcel Sanchis; Andrew Osborn; David Robinson; Katherine B. Louie; Ben P. Bowen; Robert M. Bowers; Janey Lee; Vicente Arnau; Wladimiro Díaz-Villanueva; Ramunas Stepanauskas; Terrence Gosliner; Shailesh V. Date; Trent R. Northen; Jan-Fang Cheng; Michael D. Burkart & Tanja Woyke
(2023)
Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium. Microbiome, 11(130), pp. 1 - 24
. ISSN: 2049-2618 -
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Hafez, AI; Soriano, B.; Elsayed, AA; Futami, R.; Ceprián, R.; Ramos-Ruiz, R.; Martínez, G.; Roig, FJ; Torres-Font, MA; Naya-Catala, F.; Calduch-Giner, JA; Trilla-Fuertes, L.; Gámez-Pozo, A.; Arnau, V.; Sempere-Luna, JM; Pérez-Sánchez, J.; Gabaldón, T.; Llorens, C.
(2023)
Client Applications and Server-Side Docker for Management of RNASeq and/or VariantSeq Workflows and Pipelines of the GPRO Suite. Genes, 14(267), pp. 1 - 20
. ISSN: 2073-4425 -
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Arnau, Vicente; Díaz-Villanueva, Wladimiro; Mifsut Benet, Jorge; Villasante, Paula; Beamud, Beatriz; Mompó, Paula; Sanjuan, Rafael; González-Candelas, Fernando; Domingo-Calap, Pilar; Dzunková, Mária
(2023)
Inference of the life cycle of environmental phages from genomic signature distances to their hosts. Viruses, 15(5), p. 1196
. ISSN: 1999-4915 -
Mária D¿unková; James J. La Clair; Tomá¿ Tyml; Devin Doud; Frederik Schulz; Samuel Piquer-Esteban; Dafne Porcel Sanchis; Andrew Osborn; David Robinson; Katherine B. Louie; Ben P. Bowen; Robert M. Bowers; Janey Lee; Vicente Arnau; Wladimiro Díaz-Villanueva; Ramunas Stepanauskas; Terrence Gosliner; Shailesh V. Date; Trent R. Northen; Jan-Fang Cheng; Michael D. Burkart & Tanja Woyke
(2023)
Synthase-selected sorting approach identifies a beta-lactone synthase in a nudibranch symbiotic bacterium. Microbiome, 11(130), pp. 1 - 24
. ISSN: 2049-2618 -
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Currricul@'s texts
CV summary. Degree in Physical Sciences, specializing in Electricity, Electronics and Computer Science from the University of Valencia. Doctorate in Physical Sciences in July 1993. I am Professor of Computer Architecture and Technology in the Computer Science Department of the Higher Technical School of Engineering (ETSE-UV). Since its creation in 2012 to the present, I am the director of the Master's Degree in Bioinformatics at the UV. I have taught classes in 3 subjects of this master's degree. I have been the director of 44 final master's projects (TFM), of which 3 have obtained the extraordinary prize for the best TFM of the course. I have participated in research projects on different topics: artificial vision, robotics, image processing, ophthalmology, optics and computer networks. Currently my main line of research is Bioinformatics. I have made programs for the analysis of NGS (Next Generation Sequencing) and Protein Interaction Network data. I have collaborated in the development of web applications for the analysis and visualization of bioinformatics data. I have 4 publications in Bioinformatics and 4 in BMC Bioinformatics. Since its fundation in March 2016, I have been a member of the Institute for Integrative Systems Biology (I2SysBio, UV-CSIC). I belong to the TBC, Theory, Bioinformatics and Computing research group (https://www.uv.es/tbc), where I carry out metagenomics studies applied to extremophile systems, environmental samples and also the human microbiome. I develop algorithms for the analysis of large volumes of bioinformatics data..
CV summary. Number of research periods of 6 years recognized: 4 Number of 5-year teaching periods recognized: 7 Number of doctoral theses supervised: 7 Currently supervising 6 theses. Publications in Q1 or Q2 quartile : 31 Total publications in journals and congresses: 175 Index h (Google Scholar): 16 Patents registered: 2 End of Degree Projects directed: 17 Final Master's Projects directed: 50 Directed final bachelor's thesis: 24 Awards for the best TFM in the Master in Bioinformatics: 4.