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Igual, J.C.; Matallana, E.; González-Bosch, C.; Franco, L.; Pérez-Ortín, J.E.
(1991)
A new glucose-repressible gene identified from the analysis of chromatin structure of deletion mutants of the yeast SUC2 locus. Yeast, 7, pp. 379 - 389
. ISSN: 1097-0061
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Matallana, E.; Franco, L. y Pérez-Ortín, J.E.
(1992)
Chromatin structure of the yeast SUC2 promoter in regulatory mutants. Molecular and General Genetics, 231, pp. 395 - 400
. ISSN: 0026-8925
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Igual, J.C.; González-Bosch, C; Dopazo, J.; Pérez-Ortín, J.E.
(1992)
Phylogenetic analysis of the thiolase family. Implications on the evolutionary origin of peroxisomes. Journal of Molecular Evolution, 35, pp. 147 - 155
. ISSN: 0022-2844
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Igual, J.C.; González-Bosch, C.; Franco, L.; Pérez-Ortín, J.E.
(1992)
The POT1 gene for the yeast peroxisomal thiolase is subjected to three different mechanisms of regulation. Molecular Microbiology, 6, pp. 1867 - 1875
. ISSN: 0950-382X
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Del Olmo M. y Pérez-Ortín, J.E.
(1993)
A natural A/T-rich sequence from the 3' end of yeast FBP1 gene exists as a cruciform in E. coli cells. Plasmid, 29, pp. 222 - 232
. ISSN: 0147-619X
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Tordera, V., Sendra, R. y Pérez-Ortín, J.E.
(1993)
The role of histones and their modifications in informative content of chromatin. Experientia, 49, pp. 780 - 788
. ISSN: 0014-4754
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Del Olmo, M.; Sogo, J.M.; Franco, L. y Pérez-Ortín, J.E.
(1993)
Chromatin structure of the yeast FBP1 gene: transcription-dependent changes in the regulatory and coding regions. Yeast, 9, pp. 1229 - 1240
. ISSN: 1097-0061
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Bargues, M.; Salom, D.; Gómez, A.; Paricio, N.; Pérez-Alonso, M. y Pérez-Ortín, J.E.
(1996)
Sequencing analysis of a 4.1 kb subtelomeric region from yeast chromosome IV identifies HXT15, a new member of the hexose transporter family. Yeast, 12, pp. 1005 - 1011
. ISSN: 1097-0061
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Puig, S.; Querol, A.; Ramón, D. y Pérez-Ortín, J.E.
(1996)
Evaluation of the use of late phase gene promoters for the expression of enological enzymes in an industrial wine yeast strain. Biotechnology Letters, 18, pp. 887 - 892
. ISSN: 0141-5492
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Jacq, C...Pérez-Ortín, J.E. et al.
(1997)
The complete nucleotide sequence of yeast chromosome IV. Nature, 387 (suplement), pp. 75 - 78
. ISSN: 0028-0836
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Aranda, A.; Pérez-Ortín, J.E.; Benham, C.J. y del Olmo, M.
(1997)
Analysis of the in vivo structure of a natural alternating d(TA)n sequence in yeast chromatin. Yeast, 13, pp. 313 - 326
. ISSN: 1097-0061
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Puig, S., Ramón D. y Pérez-Ortín, J. E.
(1998)
An optimized method to obtain stable food-safe recombinant wine yeast strains. Journal of Agricultural and Food Chemistry, 46, pp. 1689 - 1693
. ISSN: 0021-8561
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Aranda, A.; Pérez-Ortín, J.E.; Moore, C. y del Olmo, M.
(1998)
Transcription termination downstream of the Saccharomyces cerevisiae FBP1 poly(A) site does not depend on efficient 3' end processing. RNA-A Publication of the Rna Society, 4(3), pp. 303 - 318
. ISSN: 1355-8382
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Ruiz-García, A.B.; Sendra, R.; Galiana, M.; Pamblanco, M.; Pérez-Ortín, J.E. y Tordera., V.
(1998)
HAT1 and HAT2 proteins are componets of a yeast nuclear histone acetyltransferase enzyme specific for free histone H4. Journal of Biological Chemistry, 273, pp. 12599 - 12605
. ISSN: 0021-9258
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Gimeno-Alcañiz, J.; Pérez-Ortín, J.E. y Matallana, E.
(1999)
Differential patterns of threalose accumulation in wine yeast strains during microvinification process. Biotechnology Letters, 21, pp. 271 - 274
. ISSN: 0141-5492
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Ivorra, C.; Pérez-Ortín, J.E.y del Olmo, M.
(1999)
Reverse correlation of stress-resistance ability and stuck fermentations in wine yeasts. A molecular study. Biotechnology and Bioengineering, 64(6), pp. 698 - 708
. ISSN: 0006-3592
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Rodriguez-Navarro, S.; Estruch, F. y Pérez-Ortín, J.E.
(1999)
Functional analysis of twelve ORFs from Saccharomyces cerevisiae. Yeast, 15, pp. 913 - 919
. ISSN: 1097-0061
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Puig, S.; Matallana, E. y Pérez-Ortín, J.E
(1999)
Stochastical nucleosome positioning in a yeast chromatin region is not dependent on Histone H1. Current Microbiology, 39, pp. 168 - 172
. ISSN: 0343-8651
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Puig, S.; Pérez-Ortín, J.E y Matallana, E.
(1999)
Transcriptional and structural study of a region of two convergent overlapping yeast genes. Current Microbiology, 39, pp. 369 - 373
. ISSN: 0343-8651
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Puig, S.y Pérez-Ortín, J.E.
(2000)
Stress response and expression patterns in wine fermentation of yeast genes induced at the diauxic shift. Yeast, 16, pp. 139 - 148
. ISSN: 1097-0061
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Puig, S. y Pérez-Ortín, J.E.
(2000)
Expression levels and pattern of glycolytic yeast genes during wine fermentation. Systematic and Applied Microbiology, 23, pp. 300 - 303
. ISSN: 0723-2020
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PAMBLANCO, M.; POVEDA, A.; SENDRA, R.; RODRÍGUEZ-NAVARRO, S.; PÉREZ-ORTÍN, J. E.; TORDERA, V.
(2001)
Bromodomain factor 1 (Bdf1) protein interacts with histones. Febs Letters, 496, pp. 31 - 35
. ISSN: 0014-5793
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Rodríguez-Navarro, S.; Igual, J.C.; Pérez-Ortín, J.E.
(2002)
SRC1: an intron-containing yeast gene involved in sister chromatid segregation. Yeast, 19, pp. 43 - 54
. ISSN: 1097-0061
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Pérez-Ortín, J.E.; García-Martínez, J. and Alberola T. M.
(2002)
DNA chips for yeast biotechnology. The case of wine yeasts. Journal of Biotechnology, 98, pp. 227 - 241
. ISSN: 0168-1656
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Pérez-Torrado, R., Carrasco, P., Aranda, A., Gimeno-Alcañiz, J., Pérez-Ortín, J.E., Matallana, E, y Del Olmo, M.
(2002)
Study of the first hours of vinification by the use of osmotic stress-specific response genes as probes. Systematic and Applied Microbiology, 25(1), pp. 153 - 161
. ISSN: 0723-2020
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Rodríguez-Navarro, Susana; Llorente, B.; Rodríguez-Manzaneque, M.T.; Ramne, A.; Uber Garcia, Genoveva; Marchesan, D.; Dujon, B.; Herrero,E.; Sunnerhagen, P.; Pérez-Ortín, José Enrique
(2002)
Functional analysis of yeast gene families involved in metabolism of vitamins B1 and B6. Yeast, 19, pp. 1261 - 1276
. ISSN: 1097-0061 -
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Carrasco, P.; Pérez-Ortín, J.E. y del Olmo, M.
(2003)
Arginase Activity is a Useful Marker of Growth Nitrogen Limitation During Wine Fermentations. Systematic and Applied Microbiology, 26, pp. 471 - 479
. ISSN: 0723-2020
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Rodríguez-Navarro, Susana; Fischer, Tomás; Luo, Ming Juan; Antúnez, Oreto; Brettschneider, Susanne; Pérez Ortín, José Enrique; Reed, Robin; Hurt, Ed
(2004)
SUS1, a functional component of the SAGA transcription complex and the mRNA export machinery. Cell, 116(1), pp. 75 - 86
. ISSN: 0092-8674 -
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Alberola, T. M., García-Martínez, J., Antúnez, O., Viladevall, L., Barceló, A., Ariño, J. y Pérez-Ortín, J.E.
(2004)
A new set of DNA macrochips for the yeast Saccharomyces cerevisiae: features and uses. International Microbiology, 7(3), pp. 199 - 206
. ISSN: 1139-6709 -
Pérez-Ortín, J.E.; del Olmo, M.; Matallana, E. y Tordera, V.
(1997)
Make your own gene library. Biochemical Education, 25, pp. 237 - 242
. ISSN: 0307-4412
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Del OLMO, M.; ARANDA, A.; TORDERA, V.; PÉREZ-ORTÍN, J.E.
(1998)
Detection of non-B-DNA secondary structures by S1 nuclease digestion. Journal of Chemical Education, 75, pp. 762 - 765
. ISSN: 0021-9584
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Pérez-Ortín, J.E. ; Moya, A. y Ramón, D.
(1998)
Els altres genomes. Mètode - Revista de la Universitat de València, 32, pp. 57 - 60
. ISSN: 1133-3987
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Carro, D.; García-Martínez, J; Pérez-Ortín, J.E. y Piña, B.
(2003)
Structural characterization of chromosome I size variants from a natural yeast strain. Yeast, 20, pp. 171 - 180
. ISSN: 1097-0061
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Güldener, U; Münsterkötter, M.; Kastenmüller, G; Strack1, N; van Helden, J.; Lemer, C.; Richelles, J.; Wodak, S.J.; García Martínez, José; Pérez Ortín, José E.; Michael, H.; Kaps, A.; Talla, E.; Dujon, B.; André, B.; Souciet, J.L.; De Montigny, J.; Bon, E.; Gaillardin, C. y Mewes, H.W
(2005)
CYGD: The Comprehensive Yeast Genome Database. Nucleic Acids Research, 33(suppl 1), pp. D364 - D368
. ISSN: 0305-1048 -
Pérez-Ortín, J.E. y García-Martínez, J.
(2004)
Evaluation of transcription rates at the genomic level. Bioforum Europe, 8(5), pp. 46 - 48
. ISSN: 1611-597X
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Pérez Ortín, José Enrique
(2007)
Genomics of mRNA turnover. Briefings in Functional Genomics & Proteomics, 6(4), pp. 282 - 291
. ISSN: 1473-9550 -
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Molina-Navarro, M.M.; Castells-Roca, L.; Bellí, G.; García-Martínez, J.; Marín-Navarro, J.; Moreno, J. Pérez-Ortín, J.E. y Herrero, E.
(2008)
Comprehensive transcriptional analysis of the oxidative response in yeast. Journal of Biological Chemistry, 283, pp. 17908 - 17918
. ISSN: 0021-9258
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Vicente Tordera y José E. Pérez Ortín
(2011)
Hipótesis y dogmas. Investigación y Ciencia, 2011(Agosto), pp. 3 - 3
. ISSN: 0210-136X
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M. Carmen García-López, Vicent Pelechano, M. Carmen Mirón-García, Ana I. Garrido-Godino,Alicia García, Olga Calvo, Michel Werner, José E. Pérez-Ortín, and Francisco Navarro
(2011)
The conserved foot domain of RNA Pol II associates with proteins involved in transcritpion initiation and/or early elongation. Genetics, 189, pp. 1235 - 1248
. ISSN: 0016-6731
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Haimovich, G.; Medina, D.A.; Causse, S.Z.; Garber, M.; Millán-Zambrano, G.; Barkai, O.; Chávez, S.; Pérez Ortín, José Enrique; Darzacq, X.; Choder, M.
(2013)
Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis. Cell, 153(5), pp. 1000 - 1011
. ISSN: 0092-8674 -
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Miguel, A.; Montón, F.; Li, T.; Gómez-Herreros, G.; Chávez, S.; Alepuz, P. y Pérez-Ortín, J.E.
(2013)
External conditions inversely change the RNA polymerase II elongation rate and density in yeast. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms, 1829, pp. 1248 - 1255
. ISSN: 1874-9399
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Pérez-Ortín, J.E., Alepuz, P.; Chávez, S. y Choder, M.
(2013)
Eukaryotic mRNA decay: methodologies, pathways, and links to other stages of gene expression. Journal of Molecular Biology, 425(20), pp. 3750 - 3775
. ISSN: 0022-2836
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José E. Pérez-Ortín, Daniel A. Medina, Sebastián Chavez y Joaquín Moreno
(2013)
What do you mean by transcription rate?. Bioessays, 35, pp. 1056 - 1062
. ISSN: 0265-9247
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Canadell D, García-Martínez J, Alepuz P, Pérez-Ortín JE, Ariño J.
(2015)
Impact of high pH stress on yeast gene expression: A comprehensive analysis of mRNA turnover during stress responses. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms, 1849(6), pp. 653 - 664
. ISSN: 1874-9399
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Tianlu Li; Nikki De Clercq; Daniel A. Medina; Elena Garre; Per Sunnerhagen; José E. Pérez-Ortín; Paula Alepuz
(2016)
The mRNA cap-binding protein Cbc1 is required for high and timely expression of genes by promoting the accumulation of gene-specific activators at promoters. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms, 1859, pp. 405 - 4119
. ISSN: 1874-9399
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García-Martínez, José; Delgado-Ramos, Lidia; Ayala, Guillermo; Pelechano, Vicent; Medina, Daniel A.; Carrasco, Fany; González, Ramón; Andrés-León, Eduardo; Steinmetz, Lars; Warringer, Jonas; Chávez, Sebastián; Pérez-Ortín, José E
(2016)
The cellular growth rate controls overall mRNA turnover, and modulates either transcription or degradation rates of particular gene regulons. Nucleic Acids Research, 44, pp. 3643 - 3658
. ISSN: 0305-1048 -
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José García-Martínez; Kevin Troulé; Sebastián Chávez; José E. Pérez-Ortín
(2016)
Growth Rate controls mRNA turnover in steady and non-steady states. Rna Biology, 13(12), pp. 1175 - 1181
. ISSN: 1547-6286
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Varinia García‑Molinero, José García‑Martínez, Rohit Reja, Pedro Furió‑Tarí, Oreto Antúnez, Vinesh Vinayachandran, Ana Conesa, B. Franklin Pugh, José E. Pérez‑Ortín, Susana Rodríguez‑Navarro
(2018)
The SAGA/TREX‑2 subunit Sus1 binds widely to transcribed genes and affects mRNA turnover globally. Epigenetics & Chromatin, 11(13), pp. 1 - 12
. ISSN: 1756-8935 -
Fernando Gómez-Herreros, Thanasis Margaritis, Olga Rodríguez-Galán, Vicent Pelechano, Victoria Begley, Gonzalo Millán-Zambrano, Macarena Morillo-Huesca, Mari Cruz Muñoz-Centeno, José E. Pérez-Ortín, Jesús de la Cruz, Frank C. P. Holstege y Sebastián Chávez.
(2017)
The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation. Nucleic Acids Research, 45(16), pp. 9302 - 9318
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Romero, A.M.; García-Martínez, J.; Pérez-Ortín, J.E.; Martínez-Pastor, M.T.; Puig, S.
(2022)
Changes in mRNA stability play an important role in the adaptation of yeast cells to iron deprivation. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms, 1865, p. 194800
. ISSN: 1874-9399
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Pérez-Ortín, J.E; Jordán-Pla, A; Zhang, Y; Choder, M; Pelechano, V; García-Martínez, J; Forte, Anabel; Chattopadhyay, S
(2025)
Proper 5'-3' cotranslational mRNA decay in yeast requires import of Xrn1 to the nucleus. Plos One, 20(1), p. e0308195
. ISSN: 1932-6203 -
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Canadell D, García-Martínez J, Alepuz P, Pérez-Ortín JE, Ariño J.
2015
Impact of high pH stress on yeast gene expression: A comprehensive analysis of mRNA turnover during stress responses Biochimica Et Biophysica Acta-Gene Regulatory MechanismsVolumen 1849. Número 6.
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Tianlu Li; Nikki De Clercq; Daniel A. Medina; Elena Garre; Per Sunnerhagen; José E. Pérez-Ortín; Paula Alepuz.
2016
The mRNA cap-binding protein Cbc1 is required for high and timely expression of genes by promoting the accumulation of gene-specific activators at promoters Biochimica Et Biophysica Acta-Gene Regulatory MechanismsVolumen 1859.
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García-Martínez, José; Delgado-Ramos, Lidia; Ayala, Guillermo; Pelechano, Vicent; Medina, Daniel A.; Carrasco, Fany; González, Ramón; Andrés-León, Eduardo; Steinmetz, Lars; Warringer, Jonas; Chávez, Sebastián; Pérez-Ortín, José E.
2016
The cellular growth rate controls overall mRNA turnover, and modulates either transcription or degradation rates of particular gene regulons Nucleic Acids ResearchVolumen 44.
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José García-Martínez; Kevin Troulé; Sebastián Chávez; José E. Pérez-Ortín.
2016
Growth Rate controls mRNA turnover in steady and non-steady states Rna BiologyVolumen 13. Número 12.