Software

Author

David

Published

17 July 2024

R Packages

  1. RefManageR
    • Description: Provides tools for managing and manipulating bibliographic references and creating BibTeX files.
    • Link: RefManageR on CRAN
installed.packages(RefManageR)
  1. bibtex
    • Description: Provides functions to read, manipulate, and write BibTeX files.
    • Link: bibtex on CRAN
installed.packages(bibtex)
  1. citr
    • Description: Provides functions for easy insertion of citations in R Markdown documents.
    • Link: citr on CRAN
installed.packages(citr)
  1. rcrossref
    • Description: Provides an interface to various ‘CrossRef’ APIs, allowing for citation retrieval.
    • Link: rcrossref on CRAN
installed.packages(rcrossref)

Python Programs

  1. bibtexparser
    • Description: A BibTeX parser library for Python, allowing for easy manipulation of BibTeX files.
    • Link: bibtexparser on PyPI
pip3 install bibtexparser
  1. manubot
    • Description: An open-source tool for writing scholarly manuscripts via GitHub, allowing for citation by DOIs, PubMed IDs, etc.
    • Link: manubot on GitHub
pip3 install manubot
  1. pybtex
    • Description: A BibTeX-compatible bibliography processor in Python, supporting multiple bibliography formats.
    • Link: pybtex on PyPI
pip3 install pybtex
  1. citeproc-py
    • Description: A CSL processor for Python, useful for formatting citations and bibliographies.
    • Link: citeproc-py on GitHub
pip3 install citeproc-py*

These R packages and Python programs are been used in the development of the thesis, for academic writing and research projects.