Publicacions

• External conditions inversely change the RNA polymerase II elongation rate and density in yeast

  Miguel, A.; Montón, F.; Li, T.; Gómez-Herreros, F.; Chávez, S.; Alepuz, P.; Pérez-Ortín, J. E.

  (2013).Article

  Biochimica et Biophysica Acta.

• Eukaryotic mRNA decay: methodologies, pathways, and links to other stages of gene expression

  Pérez-Ortín, J. E.; Alepuz, P.; Chávez, S.; Choder, M.

  (2013).Article

  Journal of Molecular Biology.

• What do you mean by transcription rate?: The conceptual difference between nascent transcription rate and mRNA synthesis rate is essential for the proper understanding of transcriptomic analyses

  Pérez-Ortín, J. E.; Medina, D. A.; Chávez, S.; Moreno, J.

  (2013).Article

  BIOESSAYS.

• Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis

  Haimovich, G.; Medina, D. A.; Causse, S. Z.; Garber, M.; Millán-Zambrano, G.; Barkai, O.; Chávez, S.; Pérez-Ortín, J. E.; Darzacq, X.; Choder, M.

  (2013).Article

  CELL.

• Nonsense-mediated mRNA decay controls the changes in yeast ribosomal protein pre-mRNAs levels upon osmotic stress

  Garre, E.; Romero-Santacreu, L.; Barneo-Muñoz, M.; Miguel, A.; Pérez-Ortín, J. E.; Alepuz, P.

  (2013).Article

  Plos One.

• mRNAStab–a web application for mRNA stability analysis

  Alic, A.; Pérez-Ortín, J.E.; Moreno, J.; Arnau, V.

  (2013).Article

  Bioinformatics.

• Topoisomerase II regulates yeast genes with singular chromatin architectures

  Nikolaou, C.; Bermúdez, I.; Manichanh, C.; García-Martinez, J.; Guigó, R.; Pérez-Ortín, J. E.; Roca, J.

  (2013).Article

  Nucleic Acid Research.

• Translation mediated by the yeast nuclear cap-binding protein Cbc1/Sto1 is necessary for the rapid reprogramming of translation after hyperosmotic shock..

  Garre, E.; Romero-Santcreu, L.; de Clerqc, N.; Blasco-Angulo, N.; Sunnerhagen, P.; Alepuz, P.

  (2012).Article

• The relative importance of transcription rate, cryptic transcription and mRNA stability on shaping stress responses in yeast

  García-Martínez, J.; Pelechano, V.; Chávez, S.; Herrero, E.; Pérez-Ortín, J. E.

  (2012).Article

  Transcription.

  3: 39-44

• Genome-wide studies of mRNA synthesis and degradation in eukaryotes

  Pérez-Ortín, J. E.; De Miguel-Jiménez; Chávez, S.

  (2012).Article

  Biochim. Biophys. Acta.

  En prensa