- GONZALEZ CANDELAS, FERNANDOPDI-Catedratic/a d'Universitat
- Mulet-Bayona, Juan Vicente; Cancino-Muñoz, Irving; Salvador-García, Carme; Tormo-Palop, Nuria; Guna-Serrano, María del Remedio; Ferrer-Gómez, Carolina; Melero-García, Mercedes; González-Candelas, Fernando; Gimeno-Cardona, Concepción (2024) Genotypic and phenotypic characterisation of a nosocomial outbreak of Candida auris in Spain during 5 years. Mycoses , 67(8), pp. e13776-1 - 10 . ISSN: 0933-7407
- Gallego-García, Pilar; Estévez-Gómez, Nuria; De Chiara, Loretta; Alvariño, Pilar; M. Juiz-González, Pedro; Torres-Beceiro, Isabel; Poza, Margarita; Vallejo, Juan A.; Rumbo-Feal, Soraya; Conde-Pérez, Kelly; Aja-Macaya, Pablo; Ladra, Susana; Moreno-Flores, Antonio; Gude-González, María J.; Coira, Amparo; Aguilera, Antonio; Costa-Alcalde, José J.; Trastoy, Rocío; Barbeito-Castiñeiras, Gema; García-Souto, Daniel; Tubio, José M. C.; Trigo-Daporta, Matilde; Camacho-Zamora, Pablo; García Costa, Juan; González-Domínguez, María; Canoura-Fernández, Luis; González-Peña, Daniel; Pérez, Sonia; Cabrera, Jorge J.; Daviña, Carlos; Veiga, Maria Isabel; Sousa, João Carlos; Osório, Nuno S.; Comas, Iñaki; González-Candelas, Fernando; Hong, Samuel L.; Bollen, Nena; Dellicour, Simon; Baele, Guy; Suchard, Marc A.; Lemey, Philippe; Agulla, Andrés; Bou, Germán; Alonso-García, Pilar; Pérez-del-Molino, María Luisa; García-Campello, Marta; Paz-Vidal, Isabel; Regueiro, Benito; EPICOVIGAL Consortium; Posada, David (2024) Dispersal history of SARS-CoV-2 in Galicia, Spain. Journal of Medical Virology , 96(7), pp. e29773-1 - 13 . ISSN: 0146-6615
- Majander, Kerttu; Pla-Diaz, Marta; du Plessis, Louis; Arora, Natasha; Pezo Lanfranco, Luis; Eggers, Sabine; Filippini, Jose; González-Candelas, Fernando; Schuenemann, Verena J (2024) Redefining the treponemal history through pre-Columbian genomes from Brazil. Nature , 627, pp. 182 - 188 . ISSN: 0028-0836
- García-Marín, Ana María; Cancino-Muñoz, Irving; Torres-Puente, Manuela; Villamayor, Luis M; Borrás, Rafael; Borrás-Máñez, María; Bosque, Montserrat; Camarena, Juan J; Colomer-Roig, Ester; Colomina, Javier; Escribano, Isabel; Esparcia-Rodríguez, Óscar; Gil-Brusola, Ana; Gimeno, Concepcion; Gimeno-Gascón, Adelina; Gomila-Sard, Bárbara; Gónzales-Granda, Damiana; Gonzalo-Jiménez, Nieves; Guna-Serrano, María Remedios; López-Hontangas, José Luis; Martín-González, Coral; Moreno-Muñoz, Rosario; Navarro, David; Navarro, María; Orta, Nieves; Pérez, Elvira; Prat, Josep; Rodriguez, Juan Carlos; Ruiz-García, María Montserrat; Vanaclocha, Hermelinda; González-Candelas, Fernando; Furio, Victoria; Comas, Iñaki (2024) Role of the first WHO mutation catalogue in the diagnosis of antibiotic resistance in Mycobacterium tuberculosis in the Valencia Region, Spain: a retrospective genomic analysis. Lancet Microbe , 5(1), pp. e43 - e51 . ISSN: 2666-5247
- Álvarez-Herrera, Miguel; Sevilla, Jordi; Ruiz-Rodríguez, Paula; Vergara, Andrea; Vila, Jordi; Cano-Jiménez, Pablo; González-Candelas, Fernando; Comas, Iñaki; Coscolla, Mireia (2024) VIPERA: Viral Intra-Patient Evolution Reporting and Analysis. Virus Evolution , 10(1), p. veae018 . ISSN: 2057-1577
- García-González, N.; Fuster, B.; Tormo, N.; Salvador, C.; Gimeno, C.; González-Candelas, F. (2023) Genomic analysis of the initial dissemination of carbapenem-resistant Klebsiella pneumoniae clones in a tertiary hospital. Microbial Genomics , 9(6), p. 001032 . ISSN: 2057-5858
- Arnau, Vicente; Díaz-Villanueva, Wladimiro; Mifsut Benet, Jorge; Villasante, Paula; Beamud, Beatriz; Mompó, Paula; Sanjuan, Rafael; González-Candelas, Fernando; Domingo-Calap, Pilar; Dzunková, Mária (2023) Inference of the life cycle of environmental phages from genomic signature distances to their hosts. Viruses , 15(5), p. 1196 . ISSN: 1999-4915
- Camacho, Jorge; Giménez, Estela; Albert, Eliseo; Zulaica, Joao; Álvarez-Rodríguez, Beatriz; Torres, Ignacio; Rusu, Luciana; Burgos, Javier S.; Peiró, Salvador; Vanaclocha, Hermelinda; Limón, Ramón; Alcaraz, Maria Jesús; Sánchez-Payá, José; Díez-Domingo, Javier; Comas, Iñaki; González-Candelas, Fernando; Geller, Ron; Navarro, David (2023) Cumulative incidence of SARS-CoV-2 infection in the general population of the Valencian Community (Spain) after the surge of the Omicron BA.1 variant. Journal of Medical Virology , 95(1), p. e28284 . ISSN: 0146-6615
- Beamud, Beatriz; García-González, Neris; Gómez-Ortega, Mar; González-Candelas, Fernando; Domingo-Calap, Pilar; Sanjuán, Rafael (2023) Genetic determinants of host tropism in Klebsiella phages. Cell Reports , 42(2), p. 112048 . ISSN: 2211-1247
- García-González, Neris; Beamud, Beatriz; Fuster, Begoña; Giner, Salvador; Domínguez, Mª Victoria; Sánchez, Antonia; Sevilla, Jordi; Coque, Teresa; Gimeno, Concepción; González-Candelas, Fernando (2023) Tracking the emergence and dissemination of a blaNDM-23 gene in a multidrug resistance plasmid of K. pneumoniae. Microbiology Spectrum , 11(2), p. 2585-22 . ISSN: 2165-0497
- Vázquez-Morón, Sonia; Iglesias-Caballero, María; Lepe, José Antonio; Garcia, Federico; Melón, Santiago; Marimon, José M.; García de Viedma, Darío; Folgueira, Maria Dolores; Galán, Juan Carlos; López-Causapé, Carla; Benito-Ruesca, Rafael; Alcoba-Florez, Julia; Gonzalez Candelas, Fernando; Toro, María de; Fajardo, Miguel; Ezpeleta, Carmen; Lázaro, Fernando; Pérez Castro, Sonia; Cuesta, Isabel; Zaballos, Angel; Pozo, Francisco; Casas, Inmaculada; and members of the RELECOV network (2023) Enhancing SARS-CoV-2 surveillance through regular genomic sequencing in Spain: the RELECOV network. International Journal Of Molecular Sciences , 24(10), p. 8573 . ISSN: 1661-6596
- Sánchez-Serrano, Andrea; Mejía, Lorena; Camaró, Maria Luisa; Ortolá-Malvar, Susana; Llácer-Luna, Martín; García-González, Neris; González-Candelas, Fernando (2023) Genomic surveillance of Salmonella from the Comunitat Valenciana (Spain. Antibiotics-Basel , 12(5), p. 883 . ISSN: 2079-6382
- Tantaloa, Lauren C.; Liebermanb, Nicole A. P.; Pérez-Mañá, Clara; Vall Mayans, Marti; Ubalse, Maria; González-Beiras, Camila; Rodríguez-Gascón, Alicia; Canut, Andrés; González-Candelas, Fernando; Mueller, John; Greninger, Alexander L.; Giacani, Lorenzo; Mitjà, Oriol (2023) In vitro Antimicrobial Susceptibility of Treponema pallidum subsp. pallidum, the syphilis agent. Lancet Microbe , 4(12), pp. e0994 - e1004 . ISSN: 2666-5247
- Saludes, Verónica; Bordoy, Antoni E.; Yela, Elena; Turú, Elisabet; Not, Anna; López-Corbeto, Evelin; Egea-Cortés, Laia; González-Candelas, Fernando; Casabona, Jordi; Group for the Study and Control of Infectious Diseases in Prison (GRUMIP); Marco, Andrés; Martró, Elisa (2023) Incidence and molecular epidemiology of hepatitis C virus reinfection in prisons in Catalonia, Spain (Re-HCV study). Scientific Reports , 13, p. 16012 . ISSN: 2045-2322
- Mejía, Lorena; Espinosa-Mata, Estefanía; Freire, Ana Lucía; Zapata, Sonia; González-Candelas, Fernando (2023) Listeria monocytogenes, a silent foodborne pathogen in Ecuador. Frontiers In Microbiology , 14 . ISSN: 1664-302X
- Hufsky, Franziska; Abecasis, Ana; Babaian, Artem; Beck, Sebastian; Brierley, Liam; Dellicour, Simon; Eggeling, Christian; Elena, Santiago F.; Gieraths, Udo; Ha, Anh; Harvey, Will; Jones, Terry C.; Lamkiewicz, Kevin; Lencioni Lovate, Gabriel; Luecking, Dominik; Machyna, Martin; Nishimura, Luca; Nocke, Maximilian K.; Renard, Bernhard Y.; Sakaguchi, Shoichi; Sakellaridi, Lygeri; Spangenberg, Jannes; Tarradas-Alemany, Maria; Triebel, Sandra; Vakulenko, Yulia; Wijesekara, Yasas; González-Candelas, Fernando; Krautwurst, Sarah; Pérez-Cataluña, Alba; Randazzo, Walter; Sánchez, Gloria; Marz, Manja (2023) The International Virus Bioinformatics Meeting 2023. Viruses , 15(10), p. 2031 . ISSN: 1999-4915
- Barberá-Riera, María; de Llanos, Rosa; Barneo-Muñoz, Manuela; Bijlsma, Lubertus; Celma, Alberto; Comas, Iñaki; Gomila, Bárbara; González-Candelas, Fernando; Goterris-Cerezuelo, Rafael; Martínez, Ferran; Santateresa, Ernesto; Torres-Puente, Manuela; Zamorano-López, Núria; Bretón-Ramos, Rafael; Aguilar-Pedriguer, Eduardo; Rebagliato, Marisa; Bellido-Blasco, Juan; Hernández, Félix (2023) Wastewater monitoring of a community Covid-19 outbreak in a Spanish municipality. Journal of Environmental Exposure Assessment , 2, p. 16 . ISSN: 2771-5949
- Sánchez-Serrano, Andrea; García-González, Neris; Bonillo Jimenez, Daniel; Ruiz-Hueso, Paula; Vilanova, Rebeca; Campo, Israel; Tormo, Nuria; Salvador, Carme; Gimeno, Concepción; González-Candelas, Fernando (2022) Molecular Epidemiology of Methicillin-Resistant Staphylococcus aureus in a Tertiary Hospital from the Comunidad Valenciana (Spain). Microbial Drug Resistance , 28(12), pp. 1071 - 1078 . ISSN: 1076-6294
- Ignacio Torres; Estela Giménez; Eliseo Albert; Joao Zulaica; Beatriz Álvarez-Rodríguez; Javier S. Burgos; Salvador Peiró; Ramón Limón; Hermelinda Vanaclocha; Celia Rodado; Pilar Botija; Amelia Sifre; Borja Tur; Rosa Andrés Lozano; Iria Orosa; MªÁngeles Vicente-Ruiz; Ramón J. Carrión; Maria Á. Clari; José Sánchez-Payá; Javier Díez-Domingo; Iñaki Comas; Fernando González-Candelas; Ron Geller; David Navarro; the Valencian vaccine research program (ProVaVac) study group Comirnaty (2022) SARS-CoV-2 Omicron BA.1 variant breakthrough infections in nursing home residents after an homologous third dose of the Comirnaty® COVID-19 vaccine: Looking for correlates of protection. Journal of Medical Virology . ISSN: 0146-6615
- Estela Gimenez; Eliseo Albert; Joao Zulaica; Ignacio Torres; Luciana Rusu; Alicia Rodriguez Moreno; Javier S. Burgos; Salvador Peiro; Dolores Salas; Hermelinda Vanaclocha; Ramon Limon; Maria Jesus Alcaraz; Jose Sanchez-Pay; Javier Diez-Domingo4, Inaki Comas; Fernando Gonzales-Candelas; Ron Geller;David Navarro (2022) SARS-CoV-2 adaptive immunity in nursing home residents following a third dose of the Comirnaty® COVID-19 vaccine. Clinical Infectious Diseases . ISSN: 1058-4838
- Albert E; Burgos JS; Peiró S; Salas D; Vanaclocha H; Giménez E; Limón R; Alcaraz MJ; Sánchez-Payá J; Díez-Domingo J; Navarro D; Valencian Vaccine Research Programme (ProVaVac) Study Group.(Burgos, J.S.; Meneu de Guillerna, R.; Vanaclocha Luna, H.; Burks, D.J.; Comas, I.; Díez-Domingo, J.; Peiro, S.; González-Candelas, F.; Ferrer Albiach, C.; Hernández-Aguado, I.; Oliver Ramírez, N.; Sánchez-Payá, J.; Vento Torres, M.; Zapater Latorre, E.; Navarro, D.) (2022) Immunological response against SARS-CoV-2 following full-dose administration of Comirnaty® COVID-19 vaccine in nursing home residents. Clinical Microbiology and Infection , 28(2), pp. 279 - 284 . ISSN: 1198-743X
- Rodríguez-Grande, C.; Alcalá, L.; Estévez, A.; Sola-Campoy, P.J.; Buenestado-Serrano, S.; Martínez-Laperche, C.; Manuel de la Cueva, V.; Alonso, R.; Andrés-Zayas, C.a; Adán-Jiménez, J.; Losada, C.; Rico-Luna, C.; Comas, I.; González-Candelas, F.; Catalán, P.; Muñoz, P.; Pérez-Lago, L.; García de Viedma, D.; on behalf of the Gregorio Marañón Microbiology-ID COVID 19 Study Group. (2022) Systematic genomic and clinical analysis of SARS-CoV-2 reinfections and recurrences involving the same strain. Emerging Infectious Diseases , 28(1), pp. 85 - 94 . ISSN: 1080-6040
- Pla-Díaz, M.; Sánchez-Busó, L.; Giacani, L.; ¿majs, D.; Bosshard, P.P.; Bagheri, H.C.; Schuenemann, V. J.; Nieselt, K.; Arora, N.; González-Candelas, F. (2022) Evolutionary processes in the emergence and recent spread of the syphilis agent, Treponema pallidum. Molecular Biology and Evolution , 39(1), p. msab318 . ISSN: 0737-4038
- Costa, Rosa; Olea, Beatriz; Bracho, María Alma; Albert, Eliseo; de Michelena, Paula; Martínez-Costa, Cecilia; González-Candelas, Fernando; Navarro, David (2022) RNA viral loads of SARS-CoV-2 Alpha and Delta variants in nasopharyngeal specimens at diagnosis stratified by age, clinical presentation and vaccination status. Journal of Infection , 84(4), pp. 582 - 584 . ISSN: 0163-4453
- Lopez-Causape, Carla; Fraile-Ribot, Pablo A.; Jiménez-Serrano, Santiago; Cabot, Gabriel; del Barrio-Tofiño, Ester; Prado, Maria Carmen; Linares, Juana Maria; López, Aranzazu; Hurtado, Adoración; Riera, Elena; Serra, Antoni; Roselló, Eva; Carbó, Lluis; Fernández-Baca, Maria Victoria; Gallegos, Carmen; Saurina, Juan; Arteaga, Emilio; Salom, Maria Magdalena; Salvá, Antonia; Nicolau, Antoni; Gonzalez-Candelas, Fernando; Comas, Iñaki; Oliver, Antonio (2022) A genomic snapshot of the SARS-CoV-2 pandemic in the Balearic Islands. Frontiers In Microbiology , 12, p. 803827 . ISSN: 1664-302X
- Francés-Cuesta, Carlos; Ansari, Iván; Fernández-Garayzábal, José Francisco, Gibello, Alicia; González-Candelas, Fernando (2022) Comparative genomics and evolutionary analysis of Lactococcus garvieae isolated from human endocarditis. Microbial Genomics , 8, p. 771 . ISSN: 2057-5858
- de Michelena, Paula; Torres, Ignacio; Albert, Eliseo; Bracho, Alma; González-Candelas, Fernando; Navarro, David (2022) Impact of time elapsed since full vaccination on SARS-CoV-2 RNA load in Delta-variant breakthrough COVID-19s. Journal of Infection , 84(4), pp. 579 - 613 . ISSN: 0163-4453
- Torres, Ignacio; Bellido-Blasco, Juan B.; Gimeno, Concepción; Burgos, Javier S.; Albert, Eliseo; Moya-Malo, Raúl; Gascó-Laborda, Juan Carlos; Tornero, Ana; Soriano, Josefa; Meseguer-Ferrer, Noemí; Martínez-Serrano, María; Ortíz-Rambla, Javier; Buj, Helena; Hernández, Noelia; Peiró, Salvador; Salas, Dolores; Limón, Ramón; Vanaclocha, Hermelinda; Sánchez-Payá, José; Díez-Domingo, Javier; Comas, Iñaki; González-Candelas, Fernando; Navarro, David. (2022) SARS-CoV-2 Delta-variant breakthrough infections in nursing home residents at mid-term after Comirnaty® COVID-19 vaccination. Journal of Medical Virology , 94(8), pp. 3776 - 3782 . ISSN: 0146-6615
- hufsky, Franziska; Beslic, Denis; Boeckaerts, Dimitri; Duchene, Sebastian; Gonzalez-Tortuero, Enrique; Gruber, Andreas; Guo, Jiarong; Jansen, Daan; Juma, John; Kongkitimano, Kunaphas; Luque, Antoni; Ritsch, Muriel; Lenconi Lovate, Gabriel; Nishimura, Luca; Pas, Célia; Domingo, Esteban; Hodcroft, Emma; Lemey, Philippe; Sullivan, Matthew B.; Weber, Friedemann; González-Candelas, Fernando; Krautwurst, Sarah; Pérez-Cataluña, Alba; Randazzo, Walter; Sánchez Moragas, Gloria; Marz, Manja (2022) The International Virus Bioinformatics Meeting 2022. Viruses , 14(5), p. 973 . ISSN: 1999-4915
- Mejía, Lorena; Prado, Belén; Cárdenas, Paúl; Trueba, Gabriel; González-Candelas, Fernando (2022) The impact of genetic recombination on pathogenic Leptospira. Infection Genetics And Evolution , 102, p. 105313 . ISSN: 1567-1348
- de Michelena, Paula; Olea, Beatriz; Torres, Ignacio; González-Candelas, Fernando; Navarro, David (2022) SARS-CoV-2 RNA load in nasopharyngeal specimens from outpatients with breakthrough COVID-19 due to Omicron BA.1 and BA.2. Journal of Medical Virology , 94(12), pp. 5836 - 5840 . ISSN: 0146-6615
- de Michelena, Paula; Torres, Ignacio; -Cuevas Ferrando, Enric; González-Candelas, Fernando; Sánchez, Gloria; Navarro, David (2022) SARS-CoV-2 RNA and infectious viral loads in vaccine-breakthrough COVID-19 due to the Delta and Omicron variants. Clinical Microbiology and Infection , 29(2), pp. 256.e1 - 256.e4 . ISSN: 1198-743X
- Bordoy, Antoni; Vallès, Xavier; Not, Anna; Chiner-Oms, Alvaro; Saludes, Verónica; Torres Cervós, Judit; Roset Roig, Anna; Juan-Andrés, Concha; Sureda, Helena; Pardo-Amil, Vanessa; García, Irene; Guitart Rossell, Gemma; Cambra Cibeira, Laura; Casañ, Cristina; Giménez, Montserrat; Blanco, Ignacio; Torres-Puente, Manuela; Cancino-Muñoz, Irving; González-Candelas, Fernando; Comas, Iñaki, Martró, Elisa (2022) Epidemiological and genomic analysis of a large SARS-CoV-2 outbreak in a long-term care facility in Catalonia, Spain. Msphere , 7(6), p. 346 . ISSN: 2379-5042
- Carmona-Salido, Hector; Fouz, Belen; Sanjuán, Eva; Carda Diéguez, Miguel; Delannoy, Christian; García-González, Neris; González-Candelas, Fernando; Amaro, Carmen (2021) The widespread presence of a family of fish virulence plasmids in Vibrio vulnificus stresses its relevance as a zoonotic pathogen linked to fish farms. Emerging Microbes & Infections , 10(1), pp. 2128 - 2140 . ISSN: 2222-1751
- Ruiz-Rodríguez, Paula; Frances-Gomez, Clara; Chiner-Oms, Álvaro; López, Mariana G.; Jiménez Serrano, Santiago; Cancino-Muñoz, Irving; Ruiz-Hueso, Paula; Torres-Puente, Manuela; Bracho, Maria Alma; D'Auria, Giuseppe; Martinez-Priego, Llúcia; Guerreiro, Manuel; Montero-Alonso, Marta; Gómez, María Dolores; Piñana, José Luis; SeqCOVID-SPAIN consortium; González-Candelas, Fernando; Comas, Iñaki; Marina, Alberto; Geller, Ron; Coscolla, Mireia (2021) Evolutionary and phenotypic characterization of two spike mutations in European Lineage 20E of SARS-CoV-2. MBio , 12(6), pp. e2315 - e2321 . ISSN: 2161-2129
- Pérez Lago, L.; Aldamiz Echevarria, T.; Garcia Martinez, R.; Pérez Latorre, L.; Herranz, M.; Sola Campoy, P.; Suarez Gonzalez, J.; Martinez Laperche, C.; Comas, I.; Gonzalez Candelas, F.; Catalán, P.; Muñoz, P.; Garcia de Viedma, D. (2021) Different within-host viral evolution dynamics in three severely immunosuppressed cases with persistent SARS-CoV-2. Biomedicines , 9(7), p. 808 . ISSN: 2227-9059
- Hodcroft, Emma B.; Zuber, Monica; Nadeau, Sarah; Crawford, Katharine H.D.; Bloom, Jesse D.; Veesler, David; Vaughan, Timothy G.; Comas, Iñaki; González-Candelas, Fernando; SeqCOVID-Spain consortium; Stadler, Tanja; Neher, Richard A (2021) Emergence and spread of a SARS-CoV-2 variant through Europe in the summer of 2020. Nature , 595, pp. 707 - 712 . ISSN: 0028-0836
- Francés-Cuesta, C.; Sánchez-Hellín, V.; Gomila, B.; González-Candelas, F. (2021) Is there a widespread clone of Serratia marcescens causing outbreaks worldwide?. Journal of Hospital Infection , 108, pp. 7 - 14 . ISSN: 0195-6701
- Valiente-Mullor, C.; Beamud, B.; Ansari, I.; Francés-Cuesta, C.; García-González, N.; Mejía, L.; Ruiz-Hueso, P.; González-Candelas, F. (2021) One is not enough: on the effects of reference genome for the mapping and subsequent analyses of short-reads. Plos Computational Biology , 17(1), p. e1008678 . ISSN: 1553-734X
- Van Rie, A.; García de Viedma, D.; Meehan, C.; Comas, I.; Heupink, T.H.; De Vos, E.; Arrazola de Oñate, W.; Mathys, V.; Ceyssens, P.-J.; Groenen, G.; González-Candelas, F.; Forier, A.; Juengst, E. (2021) Realtime whole genome sequencing for TB source investigation: principles for ethical precision public health. International Journal of Tuberculosis and Lung Disease . ISSN: 1027-3719
- Guardiola-Avila, I.; Sánchez-Busó, L.; Acedo-Félix, E.; Zúñiga-Cabrera, M.; Gomez-Gil, B.; González-Candelas, F.; Noriega-Orozco, L. (2021) Core and accessory genome analysis of Vibrio mimicus. Microorganisms , 9(1), p. 191 . ISSN: 2076-2607
- López, Mariana G.; Chiner-Oms, Álvaro; García de Viedma, Darío; Ruiz-Rodriguez, Paula; Bracho, Maria Alma; Cancino-Muñoz, Irving; D'Auria, Giuseppe; de Marco, Griselda; González-Candelas*, Fernando; Comas*, Iñaki; et al. (2021) The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant. Nature Genetics , 153, pp. 1405 - 1404 . ISSN: 1061-4036
- González-Candelas, F.; Shaw, M.-A.; Phan, T.; Kulkarni-Kale, U.; Paraskevis, D.; Luciani, F.; Kimura, H.; Sironi, M. (2021) One year into the pandemic: short-term evolution of SARS-CoV-2 and emergence of new lineages. Infection Genetics And Evolution , 92, p. 104869 . ISSN: 1567-1348
- Pérez-Lago, Laura; Sola Campoy, Pedro J.; Buenestado-Serrano, Sergio; Catalán, Pilar; Estévez, Agustín; de la Cueva, Víctor Manuel; Herranz, Marta; Suárez-González, Julia; Alcalá, Luis; Comas, Iñaki; González Candelas, Fernando; Muñoz, Patricia; García de Viedma, Darío; on behalf of Gregorio Marañón Microbiology-ID COVID-19 Study Group (2021) Epidemiological and genomic snapshot of the first 100 B.1.1.7 SARS-CoV-2 cases in Madrid. Journal of Travel Medicine , 28(4), p. taab044 . ISSN: 1195-1982
- Carmona-Salido, H.; Fouz, B.; Sanjuán, E.; Carda Diéguez, M.; Delannoy, C.; García-González, N.; González-Candelas, F.; Amaro, C. (2021) Draft genomes sequences of Vibrio vulnificus recovered from moribund tilapia (Oreochromis niloticus). Microbiology Resource Announcements , 10(22), p. e0009421 . ISSN: 2576-098X
- Pérez Lago, L.; Martínez Lozano, H.; Pajares Díaz, J.A.; Díaz Gómez, A.; Machado, M.; Sola Campoy, P.; Herranz, M.; Valerio, Maricela; O., María; Andrés Zayas, C.; Comas, I.; González Candelas, F.; Bañares, R.; Catalán, P.; Muñoz, P.; García de Viedma, D. (2021) Proper assignation of reactivation in a COVID-19 recurrence initially interpreted as reinfection. Journal of Infectious Diseases , 224(5), pp. 788 - 792 . ISSN: 0022-1899
- Pérez Lago, L.; Martínez Lozano, H.; Pajares Díaz, J.A.; Díaz Gómez, A.; Machado, M.; Sola Campoy, P.; Herranz, M.; Valerio, M.; Olmedo, M.; Andrés Zayas, C.; Quesada Cubo, V.; Gómez Ruiz, M.M.; López Fresneda, N.; Sánchez Arcilla, I.; Comas, I.; González Candelas, F.; García de San José, S.; Bañares, R.; Catalán, P.; Muñoz, P.; García de Viedma, D. (2021) Overlapping of independent SARS-CoV-2 nosocomial transmissions in a complex outbreak. Msphere , 6(4), p. 389 . ISSN: 2379-5042
- Alatorre-García, T.A.; Fonseca-Coronado, S.; González-Candelas, F. (2021) Homologous recombination as a mechanism of genetic changes in bovine parainfluenza-3 virus. Veterinary Microbiology , 261, p. 10 . ISSN: 0378-1135
- Pérez Lago, L.; Pérez Latorre, L.; Herranz, Marta; Tejerina, F.; Sola-Campoy, P. J.; Sicilia, J.; Suárez-González, J.; Andrés-Zayas, C.; Chiner-Oms, A.; Jiménez-Serrano, S.; García-González, N.; Comas, I.; González Candelas, F.; Martínez-Laperche, C.; Catalán, P.; Muñoz, P.; García de Viedma, D. (2021) A complete analysis of the epidemiological scenario around a SARS-CoV-2 reinfection: previous infection events and subsequent transmission. Msphere , 6, p. e00596-21 . ISSN: 2379-5042
- Costa, R.; Bueno, F.; Giménez, E.; Bracho, M.A.; Albert, E.; Carretero, D.; Michelena, P.; Martínez-Costa, C.; González-Candelas, F.: Navarro, D. (2021) Initial viral load and decay kinetics of SARS-CoV-2 lineage B.1.1.7 in the upper respiratory tract of adults and children. Journal of Infection , 83(4), pp. 515 - 518 . ISSN: 0163-4453
- González-Candelas,F. (2021) Mutaciones, variantes y linajes del SARS-CoV-2. Virología , 24, pp. 49 - 56 . ISSN: 1133-0384
- González-Candelas,F. (2021) Genética y evolución en la pandemia de COVID-19. AmbioCiencias: Revista de Divulgación Científica e Innovación Docente , 19, pp. 63 - 72 . ISSN: 2174-8942
- Giménez, Estela; Albert, Eliseo; Zulaica, Joao; Torres, Ignacio; Rusu, Luciana; Moreno, Alicia Rodríguez; Burgos, Javier S; Peiró, Salvador; Salas, Dolores; Vanaclocha, Hermelinda; Limón, Ramón; Alcaraz, María Jesús; Sánchez-Payá, José; Díez-Domingo, Javier; Comas, Iñaki; González-Candelas, Fernando; Geller, Ron; Navarro, David; {Valencian Vaccine Research Program (ProVaVac) Study Group (2021) Severe Acute Respiratory Syndrome Coronavirus 2 Adaptive Immunity in Nursing Home Residents Following a Third Dose of the Comirnaty Coronavirus Disease 2019 Vaccine. Clinical Infectious Diseases , 75(1), pp. e865 - e868 . ISSN: 1058-4838
- Alm, Erik; Broberg, Eeva K.; Connor, Thomas; Hodcroft, Emma; Komissarov, Andrey B.; Maurer-Stroh, Sebastian; Melidou, Angeliki; Neher, Richard; O'Toole, Áine; Pereyaslov, Dmitriy; Niko Beerenwinkel, Susana Posada-Céspedes, Kim Philipp; Jablonski, Pedro Falé Ferreira, Ivan Topolsky, ..., Norbert Nowotny, Osama Abdul-Wahab, Fernando Gonzalez- Candelas, Martin H Andersen, Sarah Taylor (2020) Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020. Eurosurveillance , 25(32), pp. 1 - 8 . ISSN: 1560-7917
- Comas,I.; Cancino-Muñoz,I.; Mariner-Llicer,C.; Goig,G.A.; Ruiz-Hueso,P.; Francés-Cuesta,C.; García-González,N.; González-Candelas,F. (2020) Uso de las tecnologías de secuenciación masiva para el diagnóstico y epidemiología de enfermedades infecciosas. Enfermedades Infecciosas y Microbiología Clínica , 38(Suppl. 1), pp. 32 - 38 . ISSN: 0213-005X
- Pérez-Losada,M.; Arenas,M.; Galán,J.C.; Bracho,M.A; Hillung,J.; García-González,N.; González-Candelas,F. (2020) High-Throughput Sequencing (HTS) for the analysis of viral populations. Infection Genetics And Evolution , 80, p. 1042088 . ISSN: 1567-1348
- Sironi, M.; Hasnain, S.E.; Phan, T.; Luciani, F.; Shaw, M.-A.; Sallum, M.A.; Ezzaty Mirhashemi, M.; Morand, S.; González-Candelas, F. (2020) SARS-CoV-2 and COVID-19: A Genetic, Epidemiological, and Evolutionary Perspective. Infection Genetics And Evolution , 84, p. 104384 . ISSN: 1567-1348
- Beale, M.A.; Noguera-Julian, M.; Godornes, C.; Casadellà, M.; González-Beiras, C.; Parera, M.; Corbacho-Monne, M.; Paredes, R.; Gonzalez-Candelas, F.; Marks, M.; Lukehart, S.; Thomson, N.R.; Mitjà, O. (2020) Yaws re-emergence and bacterial drug resistance selection after mass administration of azithromycin: a genomic epidemiology investigation. Lancet Infectious Diseases , 1(6), pp. e263 - e271 . ISSN: 1473-3099
- Fuster, B.; Salvador, C.; Tormo, N.; García-González, N.; González-Candelas, F.; Gimeno, C. (2020) Molecular epidemiology and drug-resistance mechanisms in carbapenem-resistant Klebsiella pneumoniae isolated in patients from a tertiary hospital in Valencia, Spain. Journal Of Global Antimicrobial Resistance , 22, pp. 718 - 725 . ISSN: 2213-7165
- Majander, K.; Pfrengle, S.; Neukamm, J.; Kocher, A.; du Plessis, L.; Pla-Díaz, M.; Arora, N.; Akgül, G.; Salo, K.; Schats, R.; Inskip, S.; Oinonen, M.; Valk, H.; Malve, M.; Kriiska, A.; Onkamo, P.; González-Candelas, F.; Kühnert, D.; Krause, J.; Schuenemann, V.J. (2020) Ancient bacterial genomes reveal a formerly unknown diversity of Treponema pallidum strains in the early modern Europe. Current Biology , 30, pp. 1 - 16 . ISSN: 0960-9822
- Mejía, L.; Medina, J.L.; Bayas, R.; Villavicencio, F.; Zapata, S.; Matheu, J.; Wagenaar, J.A; González-Candelas, F.; Vinueza-Burgos, C. (2020) Genomic epidemiology of Salmonella Infantis in Ecuador: from poultry farms to human infections. Frontiers In Veterinary Science , 7, p. 691 . ISSN: 2297-1769
- Albert, E.; Bracho, M.A.; Serrano, A.; González-Candelas, F.; Navarro, D. (2020) Assessing the potential association between SARS-CoV-2 RNA load in the respiratory tract and COVID-19 mortality. Journal of Medical Virology . ISSN: 0146-6615
- Carazo, P.; González-Candelas, F. (2020) COVID19: los sexos y evolución, a la defensiva. Mètode - Revista de la Universitat de València , 106, pp. 88 - 89 . ISSN: 1133-3987
- Domingo-Calap, Pilar; Beamud, Beatriz; Vienne, Justine; González-Candelas, Fernando; Sanjuán, Rafael (2020) Isolation of four lytic phages infecting Klebsiella pneumoniae K22 clinical isolates from Spain. International Journal Of Molecular Sciences , 21(2), p. 425 . ISSN: 1661-6596
- Domingo-Calap, Pilar; Beamud, Beatriz; Mora,L.; González-Candelas, Fernando; Sanjuán, Rafael (2020) Isolation and characterization of two Klebsiella pneumoniae phages encoding divergent depolymerases. International Journal Of Molecular Sciences , 21(9), p. 3160 . ISSN: 1661-6596
- González-Candelas, F. (2020) La evolución, herramienta básica para estudiar los virus SARS-CoV-2. eVOLUCIÓN. Revista de la Sociedad Española de Biología Evolutiva. , 14(11), pp. 17 - 34
- Barragán-Praga,H.; Ruiz-Hueso,P.; Tedim,A.P.; González-Candelas,F.; Galán,J.C.; Cantón,R.; Morosini,M.I. (2019) Emergence and dissemination of colistin-resistant Klebsiella pneumoniae isolates expressing OXA-48 plus CTX-M-15 in patients not previously treated with colistin in a Spanish University hospital. Infection Genetics And Evolution , 93, pp. 147 - 153 . ISSN: 1567-1348
- Beamud, Beatriz; Bracho, María Alma; Gonzalez-Candelas, Fernando. (2019) Characterization of new recombinant forms of HIV-1 from the Comunidad Valenciana (Spain) by phylogenetic incongruence. Frontiers In Microbiology , 10, p. 01006 . ISSN: 1664-302X
- León-Sampedro, Ricardo; del Campo, Rosa; Rodríguez-Baños, Mercedes; Lanza, Val; Pozuelo, María José; Francés-Cuesta, Carlos; Tedim, Ana P.; Freitas, Ana; Novais, Carla; Peixe, Luísa; Willems, Rob; Corander, Jukka; González-Candelas, Fernando; Baquero, Fernando; Coque, Teresa (2019) Phylogenomics of Enterococcus faecalis from wild birds: New insights into host-associated differences in core and accessory genomes of the species. Environmental Microbiology , 21(8), pp. 3046 - 3062 . ISSN: 1462-2912
- Chiner-Oms, Alvaro; Berney, Michael; Boinett, Christine; Gonzalez-Candelas, Fernando; Young, Douglas; Gagneux, Sebastien; Jacobs, William; Parkhill, Julian; Cortes, Teresa; Comas, Iñaki (2019) Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex. Nature Communications , 10(1), p. 3994 . ISSN: 2041-1723
- Francés-Cuesta, Carlos; de la Caba, Idoia; Idigoras, Pedro; Fernández-Rodríguez, Amparo; del Valle Pérez, David; Marimón, Jose MarÍa; González-Candelas, Fernando (2019) Whole-genome sequencing of Neisseria gonorrhoeae in a forensic transmission case. Forensic Science International-Genetics , 42, pp. 141 - 146 . ISSN: 1872-4973
- Chiner-Oms, Álvaro; Sánchez-Busó, Leonor; Corander, Jukka; Gagneux, Sebastien; Harris, Simon; Young, Douglas; González-Candelas, Fernando; Comas, Iñaki (2019) Genomic determinants of sympatric speciation of the Mycobacterium tuberculosis complex across evolutionary timescales. Science Advances , 5(6), p. eaaw2207 . ISSN: 2375-2548
- Francés-Cuesta, Carlos; de la Caba, Idoia; Idigoras, Pedro; Fernández-Rodríguez, Amparo; del Valle Pérez, David; Marimón, Jose MarÍa; González-Candelas, Fernando (2019) Molecular evolution and complete genome sequences in forensic analysis: Neisseria gonorrhoeae in a transmission case. Forensic Science International-Genetics , 7, p. 432 . ISSN: 1872-4973
- González-Candelas,F.; Francés-Cuesta,C.; García-González,N. (2019) The power and limitations of genomic surveillance of bacteria. Future Microbiology , 14(16), p. 0259 . ISSN: 1746-0913
- Gambato, Martina; Gregori, Josep; Quer, Josep; Koutsoudakis, George; González, Patricia; Caro-Pérez, Noelia; García-Cehic, Damir; García-González, Neris; González-Candelas, Fernando; Esteban, Juan I.; Crespo, Gonzalo; Navasa, Miquel; Forns, Xavier; Pérez-del-Pulgar, Sofía (2019) Hepatitis C virus intrinsic molecular determinants may contribute to the development of cholestatic hepatitis after transplantation. Journal of General Virology , 100, pp. 63 - 68 . ISSN: 0022-1317
- Domingo-Calap,P.; Schubert,B.; Joly,M.; Solis,M.; Untrau,M.; Muller,C.; Le Gentil,M.; Michel,S.; Carapito,R.; Georgel,P.; Caillard,S.; Fafi-Kremer,S.; Kohlbacher,O.; Paul,N.; González-Candelas,F.; Bahram,S. (2018) An unusually high substitution rate for transplant-associated BK polyomavirus in vivo is further concentrated in HLA-C-bound viral peptides. PLOS Pathogens , 14(10), p. e1007368 . ISSN: 1553-7366
- Álvaro Chiner-Oms; Fernando González-Candelas, Iñaki Comas (2018) Gene expression models based on a reference laboratory strain are poor predictors of Mycobacterium tuberculosis complex transcriptional diversity. Scientific Reports , 8, p. 3813 . ISSN: 2045-2322
- Strouhal,M.; Oppelt,J.; Mikalová,L.; Arora,N.; Nieselt,K.; González-Candelas,F.; Smajs,D. (2018) Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes. BMC Research Notes , 16, p. 11 . ISSN: 1756-0500
- Patiño-Galindo, J.A.; González-Candelas, F., Pybus, O. (2018) The effect of RNA substitution models on viroid and RNA virus phylogenies. Genome Biology And Evolution , 10(2), pp. 657 - 666 . ISSN: 1759-6653
- Roig,F.J; González-Candelas,F.; Sanjuán,E.; Feil,E.J.; Fouz,B.; Llorens,C.; Baker-Austin,C.; Oliver,J.D.; Danin-Poleg,Y.; Gibas,C.J.; Kashi,Y.; Gulig,P.A.; Morrison,S.S.; Amaro,C. (2018) Phylogeny of Vibrio vulnificus from the analysis of the core-genome: implications for intra-species taxonomy. Frontiers In Microbiology , 8, p. 2613 . ISSN: 1664-302X
- Ramírez Soto,M.C.; Bracho,M.A.; González-Candelas,F.; Huichi-Atamaric,M. (2018) Genotypes and subgenotypes of hepatitis B virus circulating in an endemic area in Peru. Archives of Virology , 163(1), pp. 183 - 189 . ISSN: 0304-8608
- Patiño-Galindo, Juan; González-Candelas, Fernando (2018) Molecular evolution methods to study HIV-1 epidemics. Future Virology , 13(6), pp. 399 - 404 . ISSN: 1746-0794
- Grillová, Linda; Bawa, Tanika; Mikalová, Lenka; Gayet-Ageron, Angèle; Nieselt, Kay; Strouhal, Michal; Sednaoui, Patrice; Ferry, Tristan; Cavassini, Matthias; Lautenschlager, Stephan; Dutly, Fabrizio; Plá-Díaz, Marta; Krützen, Michael; González-Candelas, Fernando; Bagheri, Homayoun; ¿majs, David; Arora, Natasha; Bosshard, Philipp P. (2018) Molecular characterization of Treponema pallidum subsp. pallidum in Switzerland and France with a new Multilocus Sequence Typing scheme. Plos One , 13(7), p. e0200773 . ISSN: 1932-6203
- González-Candelas, Fernando; Bracho, Mª Alma; Hillung, Julia; Chiner, Alvaro; Ruiz-Hueso, Paula; Francés-Cuesta, Carlos; Mejía, Mª Lorena; Beamud, Beatriz; Pla-Díaz, Marta; García-González, Neris (2018) Epidemiología molecular de microorganismos patógenos: entre la evolución y la clínica. SEM@foro (Madrid) , 65, pp. 31 - 32 . ISSN: 2254-4399
- Patiño-Galindo,J.A.; Domínguez,F.; Cuevas,M.; Delgado,E.; Sánchez,M.; Pérez-Álvarez,L.; Thomson,M.M.; Sanjuán,R.; González-Candelas,F.; Cuevas,.J.M. (2018) Genome-scale analysis of evolutionary rate and selection in a fast-expanding Spanish cluster of HIV-1 subtype F. Infection Genetics And Evolution , 66, pp. 43 - 47 . ISSN: 1567-1348
- Perpiñán,E.; Caro-Pérez,N.; García-González,N.; Gregori,J.; González,P.; Bartres,C.; Soria,M.E.; Perales,C.; Lens,S.; Mariño,Z.; Londoño,M.C.; Ariza,X.; Koutsoudakis,G.; Quer,J.; González-Candelas,F.; Forns,X.; Pérez-del-Pulgar,S. (2018) Hepatitis C virus early kinetics and resistance-associated substitution dynamics during antiviral therapy with direct-acting antivirals. Journal of Viral Hepatitis , 25(12), pp. 1515 - 1525 . ISSN: 1352-0504
- Patiño-Galindo,J.A.; González-Candelas,F. (2017) The substitution rate of HIV-1 subtypes: a genomic approach. Virus Evolution , 3(2), p. vex029 . ISSN: 2057-1577
- Patiño-Galindo, JÁ; Torres-Puente, M; Bracho, MA; Alastrué, I; Juan, A; Navarro, D; Galindo, MJ; Ocete, D; Ortega, E; Gimeno, C; Belda, J; Dominguez, V; Moreno, R; Gonzalez-Candelas, F (2017) The molecular epidemiology of HIV-1 in the Comunidad Valenciana (Spain): analysis of transmission clusters. Scientific Reports , 7(11584), pp. 1 - 10 . ISSN: 2045-2322
- Arora, Natasha; Schuenemann, Verena J.; Jäger, Günter; Peltzer, Alexander; Seitz, Alexander; Herbig, Alexander; Strouhal, Michal; Grillová, Linda; Sánchez-Busó, Leonor; Kühnert, Denise; Bos, Kirsten I.; Juricevic, Nada; Rivero Davis, Leyla; Mikalová, Lenka; Bruisten, Sylvia; Komericki, Peter; French, Patrick; Grant, Paul; Pando, María A.; Gallo Vaulet, Lucía; Rodríguez Fermepin, Marcelo; Martinez, Antonio; Centurion Lara, Arturo; Giacani, Lorenzo; Norris, Steven J.; ¿majs, David; Bosshard, Philipp P.; González-Candelas, Fernando; Nieselt, Kay; Krause, Johannes; Bagheri, Homayoun C. (2017) Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster. Nature Microbiology , 2, p. 16245 . ISSN: 2058-5276
- Patiño-Galindo, J.A.; González-Candelas, F (2017) Comparative analysis of variation and selection in the HCV genome. Infection Genetics And Evolution , 49, pp. 104 - 110 . ISSN: 1567-1348
- Patiño-Galindo, Juan Ángel; Torres-Puente, Manoli; Bracho, María A.; Alastrué, Ignacio; Juan, Amparo; Navarro, David; Galindo, María José; Gimeno, Concepción; Ortega, Enrique; González-Candelas, Fernando (2017) Identification of a large, fast-expanding HIV-1 subtype B transmission cluster among MSM in Valencia, Spain. Plos One , 12(2), p. e0171062 . ISSN: 1932-6203
- Caro-Pérez,N.; Martínez-Rebollar,M.; Gregori,J.; Quer,J.; González,P.; Gambato,M.; García-González,N.; González-Candelas,F.; Costa,J.; Mallolas,J.; Forns,X.; Laguno,M.; Pérez-del-Pulgar,S. (2017) Phylogenetic analysis of an epidemic outbreak of acute hepatitis C in HIV-infected patients by ultra-deep pyrosequencing. Journal of Clinical Virology , 92, pp. 42 - 47 . ISSN: 1386-6532
- Vinuesa V; Bracho MA; Albert E; Solano C; Torres-Puente M; Gimenez E; Gonzalez Candelas F; Navarro D (2017) The impact of virus population diversity on the dynamics of cytomegalovirus DNAemia in allogeneic stem cell transplant recipients. Journal of Virology , 98(10), pp. 2530 - 2542 . ISSN: 0022-538X
- González-Candelas, F; García-González, N; Bracho, MA (2017) A molecular population genetics approach for the identification and forensic assignment of viral transmission groups. Journal of Integrated OMICS , 7(2), p. 12 . ISSN: 2182-0287
- Patiño-Galindo,J.A. ;Salvatierra,K.; González-Candelas,F.; López-Labrador, F.X. (2016) Comprehensive screening for naturally-occurring Hepatitis C virus resistance to direct-acting antivirals in the NS3, NS5A and NS5B genes in worldwide isolates from viral genotypes 1-6. Antimicrobial Agents and Chemotherapy , 60(4), pp. 2402 - 2416 . ISSN: 0066-4804
- Pujol, J.; Godoy, P.; Soldevila, N.; Castilla, J.; González-Candelas, F.; Mayoral, J.M.; Astray, J.; Garcia, S.; Martin, V.; Tamames, S.; Delgado, M.; Domínguez, A.; CIBERESP Cases and Controls in Pandemic Influenza Working Group. (2016) Social class based on occupation is associated with hospitalization for A(H1N1)pdm09 infection. Comparison between hospitalized and ambulatory cases. Epidemiology and Infection , 144(4), pp. 732 - 740 . ISSN: 0950-2688
- Álvarez, M.; Luis-Hidalgo, M.; Bracho, M.A.; Blanquer, A.; Larrea, L.; Villalba, J.; Puig, N.; Planelles, D.; Montoro, J.; González-Candelas, F.; Roig, R. (2016) Transmission of human immunodeficiency virus type-1 by fresh frozen plasma treated with methylene blue and light. Transfusion , 56, pp. 831 - 836 . ISSN: 0041-1132
- Martín, V.; Dávila-Batista, V.; Castilla, J.; Godoy, P.; Delgado-Rodríguez, M.; Soldevila, N.; Molina, A.; Fernández-Villa, T.; Astray, J.; Castro, A.; González-Candelas, F.; Mayoral, J.M.; Quintana, J.M.; Domínguez, Á.; the CIBERESP Cases and Controls in Pandemic Influenza Working Group, Spain. (2016) Comparison of body mass index (BMI) with the CUN-BAE body adiposity estimator in the prediction of hypertension and type 2 diabetes. BMC Public Health , 16, p. 82 . ISSN: 1471-2458
- Patiño-Galindo, J.;Thomson, M.M.; Pérez-Álvarez, L.; Delgado, E.; Cuevas, M.T.; Fernández-García, A.; Nájera, R.; Iribarren, J.A.; Cilla, G.; López-Soria, L.; Lezaun, M.J.; Cisterna, R.; González-Candelas, F.; (2016) Transmission dynamics of HIV-1 subtype B in the Basque Country, Spain. Infection Genetics And Evolution , 40, pp. 91 - 97 . ISSN: 1567-1348
- Godoy, Pere; Castilla, Jesús; Mayoral, José María; Delgado-Rodríguez, Miguel; Martín, Vicente; Astray, Jenaro; Soldevila, Núria; González-Candelas, Fernando; Castro, Ady; Baricot, Maretva; Tamames, Sonia; Alonso, Jordi; Cantón, Rafael; Quintana, José María; Pumarola, Tomás; Domínguez, Angela; and the CIBERESP Cases and Controls in Pandemic Influenza Working Group, Spain (2016) Smoking may increase the risk of hospitalization due to influenza. European Journal of Public Health . ISSN: 1101-1262
- Morales Suárez-Varela, Maria; Llopis-González, Agustín; González-Candelas, Fernando; Astray, Jenaro; Alonso, Jordi; Garin, Olatz; Castro, Ady; Galán, Juan Carlos; Soldevila, Nuria; Castilla, Jesús; Godoy, Pere; Delgado-Rodríguez, Miguel; Martín, Vicente; Mayoral, Jose María; Pumarola, Tomas; Quintana, José Maria; Tamames, Sonia; Rubio-López, Nuria; Dominguez, Àngela (2016) Economic evaluation of health services costs during pandemic influenza A (H1N1) pdm09 infection in pregnant and non-pregnant women in Spain (2009). Iranian Journal Of Public Health , 45(4), pp. 423 - 434 . ISSN: 2251-6085
- Pujol, Jesús; Godoy, Pere; Soldevila, Núria; Castilla, Jesús; González-Candelas, Fernando; Mayoral, José María; Astray, Jenaro; García, Susana; Martín, Vicente; Tamames, Sonia; Delgado, Miguel; Domínguez, Àngela; the CIBERESP Cases and Controls in Pandemic Influenza Working Group (2016) Effect of occupational exposure on A(H1N1)pdm09 infection and hospitalization. Annals of Occupational Hygiene , 60(8), pp. 1009 - 1019 . ISSN: 0003-4878
- Chiner-Oms, Alvaro; González Candelas, Fernando (2016) EvalMSA, a Program to Evaluate Multiple Sequence Alignments and Detect Outliers. Evolutionary Bioinformatics , 12, pp. 277 - 284 . ISSN: 1176-9343
- Martín, Vicente; Castilla, Jesús; Godoy, Pere; Delgado-Rodríguez, Miguel; Soldevila, Nuria; Tamames, Fernández-Villa, Tania; Molina, Antonio J.; Astray, Jenaro; Castro, Ady; González-Candelas, Fernando; Mayoral, José María; Quintana, José María; Domínguez, Angela; and the CIBERESP Cases and Controls in Pandemic Influenza Working Group, Spain (2016) High body mass index as a risk factor for hospitalization due to influenza: a case-control study. Archivos de Bronconeumologia , 52(6), pp. 299 - 307 . ISSN: 0300-2896
- Sánchez-Busó, L.; Guiral, S.; Crespi, S.; Moya, V.; Camaró, M.L.; Olmos, M.P.; Adrián, F.; Morera, V.; González Morán, F.; Vanaclocha, H.; González-Candelas, F. (2016) Genomic investigation of a legionellosis outbreak in a persistently colonized hotel. Frontiers In Microbiology , 6, p. 1556 . ISSN: 1664-302X
- Almagro, G.; Viale, A.M.; Montero, M.; Rahimpour, M.; Muñoz, F.J.; Baroja-Fernández, E.; Bahaji, A.; Zúñiga, M.; González-Candelas, F.; Pozueta-Romero, J. (2015) Comparative genomic and phylogenetic analyses of gammaproteobacterial glg genes traced the origin of the Escherichia coli glycogen glgBXCAP operon to the last common ancestor of the sister orders Enterobacteriales and Pasteurellales. Plos One , 10(1), p. e0115516 . ISSN: 1932-6203
- Sánchez-Busó, L.; Olmos, M.P.; Camaró, M.L.; Adrián, F.; Calafat, J.M.; González-Candelas, F. (2015) Phylogenetic analysis of environmental Legionella pneumophila isolates from an endemic area (Alcoy, Spain). Infection Genetics And Evolution , 30(1), pp. 45 - 54 . ISSN: 1567-1348
- Pérez-Losada, M.; Arenas, M.; Galán, J.C.; Palero, F.; González-Candelas, F. (2015) Recombination in viruses: mechanisms, methods of study, and evolutionary consequences. Infection Genetics And Evolution , 30, pp. 296 - 307 . ISSN: 1567-1348
- Toledo, Diana; Aerny, Nicole; Soldevila, Núria; Baricot, Maretva; Godoy, Pere; Castilla, Jesús; García-Gutierrez, Susana; Torner, Núria; Astray, Jenaro; Mayoral, Jose María; Tamames, Sonia; González Candelas, Fernando; Martín, Vicente; Díaz, José; Domínguez, Angela (2015) Managing an Online Survey about Influenza Vaccination in Primary Healthcare Workers. International Journal Of Environmental Research And Public Health , 12(1), pp. 541 - 553 . ISSN: 1661-7827
- Amadoz,A.; González-Candelas, F. (2015) A novel approach to identify candidate prognostic factors for Hepatitis C treatment response integrating clinical and viral genetic data. Evolutionary Bioinformatics , 11, pp. 15 - 24 . ISSN: 1176-9343
- González-Candelas,F. (2015) Affaire Maeso: la biologie au coeur de l¿enquête. Recherche , 496, pp. 48 - 52 . ISSN: 0029-5671
- Godoy,P.;Castilla,J.;Mayoral,J.M.;Martín,V.;Astray,J.;Torner,N.;Toledo, D.;González-Candelas,F.;García,S.;Diaz-Borregol,J.;Tamames,S.;Domínguez,A.;the Working Group for the Survey on Influenza Vaccination in Primary Health Care Professionals (2015) Influenza vaccination of primary healthcare physicians may be associated with vaccination of their patients: a vaccination coverage study. Bmc Family Practice , 16, p. 44 . ISSN: 1471-2296
- Patiño Galindo, J.A.; Torres-Puente, M.; Gimeno, C.; Ortega, E.; Navarro, D.; Galindo, M.J.; Navarro, L.; Navarro, V.; Juan, A.; Belda, J.; Bracho, M. A.; González-Candelas, F.; on behalf of CRIVIH. (2015) Expansion of the CRF19_cpx Variant in Spain. Journal of Clinical Virology , 69, pp. 146 - 149 . ISSN: 1386-6532
- Antón, A.; García, S.; Soldevila, N.; González-Candelas, F.; Godoy, P.; Castilla, J.; Mayoral, J.M.; Astray, J.; Martín, V.; Tamames, S.; Toledo, D.; Aguirre, U.; Domínguez, A.; and the CIBERESP Working Group for the Survey on Influenza Vaccination in Primary Health Care Workers. (2015) Visualizing knowledge and attitude factors related to influenza vaccination of physicians. Vaccine , 33(7), pp. 885 - 891 . ISSN: 1358-8745
- Sánchez-Busó, L.; Coscollá, M.; Palero, F.; Camaró, M.L.; Gimeno, A.; Moreno, P.; Escribano, I.; López Perezagua, M.M.; Colomina, J.; Vanaclocha, H.; González-Candelas, F. (2015) Geographical and temporal structure of Legionella pneumophila sequence types in Comunitat Valenciana (Spain), 1998-2013. Applied and Environmental Microbiology , 81(20), pp. 7106 - 7113 . ISSN: 0099-2240
- 155. Garcia-Etxebarria, K.; Bracho, M.A.; Galán, J.C.; Pumarola, T.; Castilla, J.; Ortiz de Lejarazu, R.; Rodriguez-Dominguez, M.; Bonet, N.; Garcia-Garcerà, M.; Domínguez, A.; González-Candelas, F.; Calafell, F., on behalf of the CIBERESP Cases and Controls in Pandemic Influenza Working Group. (2015) No major host genetic risk factor contributed to A(H1N1)2009 influenza severity. Plos One , 10(9), p. E00135983 . ISSN: 1932-6203
- Cancino-Muñoz, Irving; Mulet-Bayona, Juan Vicente; Salvador-García, Carme; Tormo-Palop, Nuria; Guna-Serrano, María del Remedio; Gimeno-Cardona, Concepción; González-Candelas, Fernando (2024) Evolution and Global Dispersal of Fluconazole-Resistant Candida auris.Evolution and Global Dispersal of Fluconazole-Resistant Candida auris. MBio , 16(2), p. e3164-24 . ISSN: 2161-2129
- Pla-Díaz, Marta; Akgül, Gülfirde; Molak, Martyna; du Plessis, Louis; Panagiotopoulou, Hanna; Doan, Karolina; Bogdanowicz, Wiesław; Dąbrowski, Paweł; Oziębłowski, Maciej; Kwiatkowska, Barbara; Szczurowski, Jacek; Grzelak, Joanna; Arora, Natasha; Majander, Kerttu; González-Candelas, Fernando; Schuenemann, Verena J. (2025) Insights into Treponema pallidum genomics from modern and ancient genomes using a novel mapping strategy. Bmc Biology , 23, p. 7 . ISSN: 1741-7007
- Álvarez-Herrera, Miguel; Ruiz-Rodriguez, Paula; Navarro-Domínguez, Beatriz; Zulaica, Joao; Grau, Brayan; Bracho, María Alma; Guerreiro, Manuel; Aguilar‐Gallardo, Cristóbal; González-Candelas, Fernando; Comas, Iñaki; Geller, Ron; Coscollá, Mireia (2025) Genome data artifacts and functional studies of deletion repair in the BA.1 SARS-CoV-2 spike protein. Virus Evolution , 11(1), p. veaf015 . ISSN: 2057-1577
- García-González, Neris; Beamud, Beatriz; Sevilla-Fortuny, Jordi; Sánchez-Hellín, Victoria; Vidal, Inmaculada; Rodriguez, Juan Carlos; Fuster, Begoña; Tormo, Nuria; Salvador, Carme; Gimeno, Concepción; Gomila-Sard, Bárbara; Giner Almaraz, Salvador; Martínez, Olalla; Colomina, Javier; Navarro, David; Domínguez, Victoria; González-Candelas, Fernando (2025) Genomic surveillance reveals different transmission patterns between third-generation cephalosporin and carbapenem resistance in Klebsiella pneumoniae in the Comunidad Valenciana (Spain), 2018-2020. Antimicrobial Resistance And Infection Control , 14, p. 44 . ISSN: 2047-2994
- Carbó-Ramírez, Sandra; Codoñer-Alejos, Alan; Reyes-Prieto, Mariana; Bernat, Cristina; Gil, Anabel; Ruiz-Ramírez, Jorge; Soriano-Chirona, Vicent; De Marco-Romero, Griselda; Gonzalez-Candelas, Fernando; Martinez-Priego, Llúcia (2025) One sample, three genotypes: a flanking region deletion at the D19S433 locus causes genotyping discrepancies between CE and NGS technologies. Forensic Science International-Genetics , 78, p. 103301 . ISSN: 1872-4973
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