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Here you will find manuals and tutorials for the service's equipment, as well as free image analysis software.

Manuals:

Leica SP8 Confocal Microscope

DMi8 Inverted Microscope for Live Cell Imaging

Leica DMI 3000-B Inverted Fluorescence Microscope

Video Tutorials:

  • DMi8 Microscope

Basic Configuration of LAS-X Software for Image Acquisition

Software:

Leica LAS-X: Free version allows for visualization, export, and editing of images in Leica format.

Fiji: A distribution of ImageJ2 with a wide range of pre-installed plugins to facilitate image analysis.

Ilastik: Uses machine learning algorithms to easily segment, classify, track, and count cells and other experimental data.

CellProfiler: Software that allows for easy analysis of large sets of images. Ideal for high-content screening.

QuPath: Software often used for digital pathology applications, offering a powerful set of tools for working with whole slide images.